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  5. AT3G58360

AT3G58360


Description : TRAF-like family protein


Gene families : OG_01_0000081 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G58360
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AT1G31370 No alias Ubiquitin-specific protease family C19-related protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
  • Species
  • Arabidopsis thaliana
  • Sequence
  • AT5G56452

    • AT5G56452


    Description : FBD-like domain family protein

    AT1G31380 No alias TRAF-like family protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
    AT1G31390 No alias TRAF-like family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
    AT1G31400 No alias TRAF-like family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
    AT2G01790 No alias TRAF-like family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
    AT2G05420 No alias TRAF-like family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
    AT2G42455 No alias No description available 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
    AT2G42460 No alias TRAF-like family protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
    AT2G42465 No alias No description available 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
    AT3G27040 No alias Meprin and TRAF (MATH) homology domain-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
    AT3G29580 No alias Arabidopsis phospholipase-like protein (PEARLI 4) with... 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
    AT3G44790 No alias TRAF-like family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
    AT3G44805 No alias TRAF-like superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
    AT3G58210 No alias TRAF-like family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
    AT3G58220 No alias TRAF-like family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
    AT3G58280 No alias Arabidopsis phospholipase-like protein (PEARLI 4) with... 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
    AT3G58300 No alias Arabidopsis phospholipase-like protein (PEARLI 4) family 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
    AT3G58320 No alias Ubiquitin-specific protease family C19-related protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
    AT3G58330 No alias Arabidopsis phospholipase-like protein (PEARLI 4) family 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
    AT3G58340 No alias TRAF-like family protein 0.13 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
    AT3G58370 No alias TRAF-like family protein 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
    AT3G58400 No alias TRAF-like family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

    Type GO Term Name Evidence Source
    MF GO:0003674 molecular_function ND Interproscan
    CC GO:0005737 cytoplasm ISM Interproscan
    BP GO:0008150 biological_process ND Interproscan
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    Type GO Term Name Evidence Source
    MF GO:0003743 translation initiation factor activity IEP HCCA
    MF GO:0004743 pyruvate kinase activity IEP HCCA
    MF GO:0004871 obsolete signal transducer activity IEP HCCA
    MF GO:0005375 copper ion transmembrane transporter activity IEP HCCA
    CC GO:0005634 nucleus IEP HCCA
    BP GO:0006413 translational initiation IEP HCCA
    BP GO:0006857 oligopeptide transport IEP HCCA
    MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
    BP GO:0009555 pollen development IEP HCCA
    BP GO:0009786 regulation of asymmetric cell division IEP HCCA
    MF GO:0015089 high-affinity copper ion transmembrane transporter activity IEP HCCA
    MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
    MF GO:0015398 high-affinity secondary active ammonium transmembrane transporter activity IEP HCCA
    BP GO:0015695 organic cation transport IEP HCCA
    BP GO:0015833 peptide transport IEP HCCA
    CC GO:0022627 cytosolic small ribosomal subunit IEP HCCA
    BP GO:0048229 gametophyte development IEP HCCA
    BP GO:0048446 petal morphogenesis IEP HCCA
    BP GO:0072488 ammonium transmembrane transport IEP HCCA
    BP GO:0080154 regulation of fertilization IEP HCCA
    BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP HCCA
    InterPro domains Description Start Stop
    IPR002083 MATH/TRAF_dom 13 131
    PLAZA 3.0 Dicots AT3G58360