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  5. AT3G58420

AT3G58420


Description : TRAF-like superfamily protein


Gene families : OG_01_0000081 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G58420
Cluster HCCA: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
AT1G31370 No alias Ubiquitin-specific protease family C19-related protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G42455 No alias No description available 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G29580 No alias Arabidopsis phospholipase-like protein (PEARLI 4) with... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G44790 No alias TRAF-like family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58240 No alias TRAF-like superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58340 No alias TRAF-like family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58440 No alias TRAF-like superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0001676 long-chain fatty acid metabolic process IEP HCCA
BP GO:0002213 defense response to insect IEP HCCA
MF GO:0004638 phosphoribosylaminoimidazole carboxylase activity IEP HCCA
MF GO:0005345 purine nucleobase transmembrane transporter activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006188 IMP biosynthetic process IEP HCCA
BP GO:0006189 'de novo' IMP biosynthetic process IEP HCCA
BP GO:0006863 purine nucleobase transport IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP HCCA
CC GO:0009320 phosphoribosylaminoimidazole carboxylase complex IEP HCCA
BP GO:0009913 epidermal cell differentiation IEP HCCA
MF GO:0015205 nucleobase transmembrane transporter activity IEP HCCA
BP GO:0015851 nucleobase transport IEP HCCA
BP GO:0030855 epithelial cell differentiation IEP HCCA
BP GO:0045168 cell-cell signaling involved in cell fate commitment IEP HCCA
BP GO:0046040 IMP metabolic process IEP HCCA
BP GO:0048445 carpel morphogenesis IEP HCCA
BP GO:0048629 trichome patterning IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT3G58420