1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G58460

AT3G58460


Description : RHOMBOID-like protein 15


Gene families : OG_01_0006747 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006747_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G58460
Cluster HCCA: Cluster_176


Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000164 protein phosphatase type 1 complex IEP HCCA
CC GO:0000795 synaptonemal complex IEP HCCA
BP GO:0003002 regionalization IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003691 double-stranded telomeric DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0005496 steroid binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005615 extracellular space IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005635 nuclear envelope IEP HCCA
CC GO:0005712 chiasma IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005795 Golgi stack IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006355 regulation of transcription, DNA-templated IEP HCCA
BP GO:0006470 protein dephosphorylation IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0007029 endoplasmic reticulum organization IEP HCCA
MF GO:0008083 growth factor activity IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
MF GO:0008476 protein-tyrosine sulfotransferase activity IEP HCCA
CC GO:0008540 proteasome regulatory particle, base subcomplex IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009404 toxin metabolic process IEP HCCA
BP GO:0009407 toxin catabolic process IEP HCCA
BP GO:0009593 detection of chemical stimulus IEP HCCA
BP GO:0009647 skotomorphogenesis IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009720 detection of hormone stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009726 detection of endogenous stimulus IEP HCCA
BP GO:0009729 detection of brassinosteroid stimulus IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009734 auxin-activated signaling pathway IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0009825 multidimensional cell growth IEP HCCA
BP GO:0009956 radial pattern formation IEP HCCA
BP GO:0010080 regulation of floral meristem growth IEP HCCA
BP GO:0010082 regulation of root meristem growth IEP HCCA
BP GO:0010087 phloem or xylem histogenesis IEP HCCA
BP GO:0010089 xylem development IEP HCCA
BP GO:0010268 brassinosteroid homeostasis IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010492 maintenance of shoot apical meristem identity IEP HCCA
BP GO:0010588 cotyledon vascular tissue pattern formation IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0019827 stem cell population maintenance IEP HCCA
BP GO:0022622 root system development IEP HCCA
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
MF GO:0030545 signaling receptor regulator activity IEP HCCA
MF GO:0030546 signaling receptor activator activity IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
CC GO:0031982 vesicle IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
CC GO:0032300 mismatch repair complex IEP HCCA
CC GO:0032390 MutLbeta complex IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
MF GO:0035064 methylated histone binding IEP HCCA
BP GO:0035265 organ growth IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
MF GO:0042162 telomeric DNA binding IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
MF GO:0043047 single-stranded telomeric DNA binding IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0048018 receptor ligand activity IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048527 lateral root development IEP HCCA
BP GO:0048528 post-embryonic root development IEP HCCA
BP GO:0048657 anther wall tapetum cell differentiation IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051457 maintenance of protein location in nucleus IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0055088 lipid homeostasis IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0060771 phyllotactic patterning IEP HCCA
BP GO:0060772 leaf phyllotactic patterning IEP HCCA
BP GO:0060774 auxin mediated signaling pathway involved in phyllotactic patterning IEP HCCA
CC GO:0071458 integral component of cytoplasmic side of endoplasmic reticulum membrane IEP HCCA
CC GO:0071782 endoplasmic reticulum tubular network IEP HCCA
BP GO:0071786 endoplasmic reticulum tubular network organization IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP HCCA
BP GO:0080129 proteasome core complex assembly IEP HCCA
BP GO:0090696 post-embryonic plant organ development IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
BP GO:0098727 maintenance of cell number IEP HCCA
BP GO:0098754 detoxification IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
CC GO:0098827 endoplasmic reticulum subcompartment IEP HCCA
MF GO:0098847 sequence-specific single stranded DNA binding IEP HCCA
CC GO:0099086 synaptonemal structure IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
MF GO:0140030 modification-dependent protein binding IEP HCCA
MF GO:0140034 methylation-dependent protein binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990391 DNA repair complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 60 213
IPR015940 UBA 363 398
PLAZA 3.0 Dicots AT3G58460