AT3G58730


Description : vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD)


Gene families : OG_01_0005129 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005129_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G58730
Cluster HCCA: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
Cre09.g405050 No alias Solute transport.primary active transport.V-type ATPase... 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g08620.1 No alias subunit D of V-type ATPase peripheral V1 subcomplex 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c27_320V3.1 No alias vacuolar ATP synthase subunit D (VATD) / V-ATPase D... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_9410V3.1 No alias vacuolar ATP synthase subunit D (VATD) / V-ATPase D... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0000325 plant-type vacuole IDA Interproscan
CC GO:0005773 vacuole IDA Interproscan
CC GO:0005774 vacuolar membrane IDA Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006007 glucose catabolic process RCA Interproscan
BP GO:0006623 protein targeting to vacuole RCA Interproscan
BP GO:0006816 calcium ion transport RCA Interproscan
BP GO:0007030 Golgi organization RCA Interproscan
BP GO:0007033 vacuole organization RCA Interproscan
BP GO:0009651 response to salt stress RCA Interproscan
CC GO:0016020 membrane IDA Interproscan
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
MF GO:0002020 protease binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0004124 cysteine synthase activity IEP HCCA
MF GO:0004846 urate oxidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 ion channel activity IEP HCCA
MF GO:0005227 calcium activated cation channel activity IEP HCCA
MF GO:0005244 voltage-gated ion channel activity IEP HCCA
MF GO:0005249 voltage-gated potassium channel activity IEP HCCA
MF GO:0005261 cation channel activity IEP HCCA
MF GO:0005267 potassium channel activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005753 mitochondrial proton-transporting ATP synthase complex IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
CC GO:0005782 peroxisomal matrix IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005829 cytosol IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006144 purine nucleobase metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006535 cysteine biosynthetic process from serine IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006760 folic acid-containing compound metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006833 water transport IEP HCCA
BP GO:0006900 vesicle budding from membrane IEP HCCA
BP GO:0006972 hyperosmotic response IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008154 actin polymerization or depolymerization IEP HCCA
MF GO:0008324 cation transmembrane transporter activity IEP HCCA
MF GO:0008752 FMN reductase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0009112 nucleobase metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009396 folic acid-containing compound biosynthetic process IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009532 plastid stroma IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0009566 fertilization IEP HCCA
BP GO:0009567 double fertilization forming a zygote and endosperm IEP HCCA
CC GO:0009570 chloroplast stroma IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
CC GO:0009705 plant-type vacuole membrane IEP HCCA
BP GO:0009735 response to cytokinin IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0010119 regulation of stomatal movement IEP HCCA
BP GO:0010351 lithium ion transport IEP HCCA
BP GO:0010496 intercellular transport IEP HCCA
BP GO:0010497 plasmodesmata-mediated intercellular transport IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0010647 positive regulation of cell communication IEP HCCA
MF GO:0015075 ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015269 calcium-activated potassium channel activity IEP HCCA
MF GO:0015271 outward rectifier potassium channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015385 sodium:proton antiporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP HCCA
BP GO:0015986 ATP synthesis coupled proton transport IEP HCCA
BP GO:0016045 detection of bacterium IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0016050 vesicle organization IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
CC GO:0016469 proton-transporting two-sector ATPase complex IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016656 monodehydroascorbate reductase (NADH) activity IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016663 oxidoreductase activity, acting on other nitrogenous compounds as donors, oxygen as acceptor IEP HCCA
BP GO:0017014 protein nitrosylation IEP HCCA
BP GO:0018119 peptidyl-cysteine S-nitrosylation IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0018198 peptidyl-cysteine modification IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019829 ATPase-coupled cation transmembrane transporter activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022839 ion gated channel activity IEP HCCA
MF GO:0022843 voltage-gated cation channel activity IEP HCCA
MF GO:0022853 active ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030004 cellular monovalent inorganic cation homeostasis IEP HCCA
BP GO:0030007 cellular potassium ion homeostasis IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
BP GO:0030834 regulation of actin filament depolymerization IEP HCCA
BP GO:0030835 negative regulation of actin filament depolymerization IEP HCCA
BP GO:0030837 negative regulation of actin filament polymerization IEP HCCA
BP GO:0031333 negative regulation of protein-containing complex assembly IEP HCCA
CC GO:0031907 microbody lumen IEP HCCA
BP GO:0032119 sequestering of zinc ion IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032272 negative regulation of protein polymerization IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
BP GO:0034220 ion transmembrane transport IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042044 fluid transport IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042335 cuticle development IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
BP GO:0043181 vacuolar sequestering IEP HCCA
BP GO:0043242 negative regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
CC GO:0045259 proton-transporting ATP synthase complex IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046686 response to cadmium ion IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048509 regulation of meristem development IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050801 ion homeostasis IEP HCCA
MF GO:0051015 actin filament binding IEP HCCA
BP GO:0051017 actin filament bundle assembly IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
MF GO:0051139 metal ion:proton antiporter activity IEP HCCA
BP GO:0051238 sequestering of metal ion IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0051494 negative regulation of cytoskeleton organization IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0051693 actin filament capping IEP HCCA
BP GO:0055062 phosphate ion homeostasis IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055067 monovalent inorganic cation homeostasis IEP HCCA
BP GO:0055075 potassium ion homeostasis IEP HCCA
BP GO:0055080 cation homeostasis IEP HCCA
BP GO:0055081 anion homeostasis IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0061572 actin filament bundle organization IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP HCCA
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP HCCA
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP HCCA
BP GO:0072506 trivalent inorganic anion homeostasis IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090333 regulation of stomatal closure IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
BP GO:0098543 detection of other organism IEP HCCA
BP GO:0098581 detection of external biotic stimulus IEP HCCA
BP GO:0098655 cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901879 regulation of protein depolymerization IEP HCCA
BP GO:1901880 negative regulation of protein depolymerization IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
BP GO:1902904 negative regulation of supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR002699 V_ATPase_D 17 208
PLAZA 3.0 Dicots AT3G58730