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AT3G61180


Description : RING/U-box superfamily protein


Gene families : OG_01_0000398 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000398_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G61180
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Mp2g06960.1 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_10570V3.1 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3s52_140V3.1 No alias No annotation 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005774 vacuolar membrane IDA Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000303 response to superoxide IEP HCCA
BP GO:0000305 response to oxygen radical IEP HCCA
MF GO:0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEP HCCA
MF GO:0004057 arginyltransferase activity IEP HCCA
MF GO:0004439 phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IEP HCCA
MF GO:0004707 MAP kinase activity IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
BP GO:0006464 cellular protein modification process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006491 N-glycan processing IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009100 glycoprotein metabolic process IEP HCCA
BP GO:0009556 microsporogenesis IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009648 photoperiodism IEP HCCA
BP GO:0009734 auxin-activated signaling pathway IEP HCCA
BP GO:0009737 response to abscisic acid IEP HCCA
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009863 salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0010025 wax biosynthetic process IEP HCCA
BP GO:0010029 regulation of seed germination IEP HCCA
BP GO:0010143 cutin biosynthetic process IEP HCCA
BP GO:0010150 leaf senescence IEP HCCA
BP GO:0010166 wax metabolic process IEP HCCA
BP GO:0010345 suberin biosynthetic process IEP HCCA
BP GO:0010374 stomatal complex development IEP HCCA
MF GO:0016262 protein N-acetylglucosaminyltransferase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0016598 protein arginylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
BP GO:0019216 regulation of lipid metabolic process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
BP GO:0032957 inositol trisphosphate metabolic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
BP GO:0034293 sexual sporulation IEP HCCA
MF GO:0034593 phosphatidylinositol bisphosphate phosphatase activity IEP HCCA
MF GO:0034595 phosphatidylinositol phosphate 5-phosphatase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042752 regulation of circadian rhythm IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0043813 phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity IEP HCCA
BP GO:0043934 sporulation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044267 cellular protein metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP HCCA
BP GO:0046855 inositol phosphate dephosphorylation IEP HCCA
BP GO:0048236 plant-type sporogenesis IEP HCCA
BP GO:0048573 photoperiodism, flowering IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0050994 regulation of lipid catabolic process IEP HCCA
BP GO:0051321 meiotic cell cycle IEP HCCA
BP GO:0051341 regulation of oxidoreductase activity IEP HCCA
BP GO:0051353 positive regulation of oxidoreductase activity IEP HCCA
BP GO:0052386 cell wall thickening IEP HCCA
BP GO:0052543 callose deposition in cell wall IEP HCCA
MF GO:0052866 phosphatidylinositol phosphate phosphatase activity IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0070300 phosphatidic acid binding IEP HCCA
BP GO:0071545 inositol phosphate catabolic process IEP HCCA
BP GO:0080022 primary root development IEP HCCA
BP GO:0090558 plant epidermis development IEP HCCA
BP GO:0090693 plant organ senescence IEP HCCA
BP GO:0097305 response to alcohol IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
MF GO:0106018 phosphatidylinositol-3,5-bisphosphate phosphatase activity IEP HCCA
MF GO:0106019 phosphatidylinositol-4,5-bisphosphate phosphatase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
BP GO:1900490 positive regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP HCCA
BP GO:1901568 fatty acid derivative metabolic process IEP HCCA
BP GO:1901570 fatty acid derivative biosynthetic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
BP GO:2001215 regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 322 364
PLAZA 3.0 Dicots AT3G61180