AT3G61340

Description : F-box and associated interaction domains-containing protein

Gene families : OG_01_0000008 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000008_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G61340
Cluster	HCCA: Cluster_40

Target	Alias	Description	ECC score	Gene Family Method
AT1G23037	No alias	F-box associated ubiquitination effector family protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G30780	No alias	F-box associated ubiquitination effector family protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G30790	No alias	F-box and associated interaction domains-containing protein	0.07	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G30920	No alias	F-box family protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G30925	No alias	phospholipase Cs	0.07	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G30930	No alias	F-box family protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31080	No alias	F-box family protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31090	No alias	F-box family protein	0.07	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31163	No alias	F-box associated ubiquitination effector family protein	0.09	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31620	No alias	unknown protein; Has 9 Blast hits to 9 proteins in 2...	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G32420	No alias	F-box and associated interaction domains-containing protein	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G32660	No alias	F-box and associated interaction domains-containing protein	0.11	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G33010	No alias	F-box and associated interaction domains-containing protein	0.08	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G33020	No alias	F-box and associated interaction domains-containing protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G46840	No alias	F-box family protein	0.09	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47350	No alias	F-box associated ubiquitination effector family protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47730	No alias	F-box and associated interaction domains-containing protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47765	No alias	F-box and associated interaction domains-containing protein	0.08	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47800	No alias	F-box and associated interaction domains-containing protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47810	No alias	F-box and associated interaction domains-containing protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G50880	No alias	F-box and associated interaction domains-containing protein	0.09	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G52495	No alias	No description available	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G53360	No alias	F-box associated ubiquitination effector family protein	0.11	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G53370	No alias	F-box and associated interaction domains-containing protein	0.1	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G53815	No alias	F-box family protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G55070	No alias	F-box and associated interaction domains-containing protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G60370	No alias	F-box and associated interaction domains-containing protein	0.09	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G61060	No alias	F-box family protein	0.07	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G67130	No alias	F-box family protein	0.07	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G02890	No alias	F-box family protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G16220	No alias	F-box and associated interaction domains-containing protein	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G16450	No alias	F-box and associated interaction domains-containing protein	0.08	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G16810	No alias	F-box and associated interaction domains-containing protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G23160	No alias	F-box family protein	0.1	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G31470	No alias	F-box and associated interaction domains-containing protein	0.09	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G32470	No alias	F-box associated ubiquitination effector family protein	0.09	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G40910	No alias	F-box and associated interaction domains-containing protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G10790	No alias	F-box associated ubiquitination effector family protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G23960	No alias	F-box and associated interaction domains-containing protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G47150	No alias	F-box and associated interaction domains-containing protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G49440	No alias	F-box associated ubiquitination effector family protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G52320	No alias	F-box and associated interaction domains-containing protein	0.08	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G57580	No alias	F-box and associated interaction domains-containing protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G13060	No alias	F-box associated ubiquitination effector family protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G19940	No alias	F-box and associated interaction domains-containing protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G29970	No alias	F-box and associated interaction domains-containing protein	0.07	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G15670	No alias	F-box family protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G18160	No alias	F-box and associated interaction domains-containing protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G22791	No alias	F-box family protein	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G42430	No alias	F-box and associated interaction domains-containing protein	0.08	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G44345	No alias	F-box associated ubiquitination effector family protein	0.07	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G50220	No alias	F-box family protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G52610	No alias	F-box and associated interaction domains-containing protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G62060	No alias	F-box and associated interaction domains-containing protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006310	DNA recombination	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007059	chromosome segregation	RCA	Interproscan
BP	GO:0007129	homologous chromosome pairing at meiosis	RCA	Interproscan
BP	GO:0007131	reciprocal meiotic recombination	RCA	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0035825	homologous recombination	None	Extended
BP	GO:0042138	meiotic DNA double-strand break formation	RCA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0061982	meiosis I cell cycle process	None	Extended
BP	GO:0070192	chromosome organization involved in meiotic cell cycle	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090305	nucleic acid phosphodiester bond hydrolysis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0140527	reciprocal homologous recombination	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1903046	meiotic cell cycle process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000003	reproduction	IEP	HCCA
BP	GO:0000723	telomere maintenance	IEP	HCCA
MF	GO:0000976	transcription cis-regulatory region binding	IEP	HCCA
MF	GO:0000987	cis-regulatory region sequence-specific DNA binding	IEP	HCCA
MF	GO:0001067	transcription regulatory region nucleic acid binding	IEP	HCCA
CC	GO:0001673	male germ cell nucleus	IEP	HCCA
MF	GO:0004108	citrate (Si)-synthase activity	IEP	HCCA
MF	GO:0004484	mRNA guanylyltransferase activity	IEP	HCCA
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
MF	GO:0004860	protein kinase inhibitor activity	IEP	HCCA
MF	GO:0004861	cyclin-dependent protein serine/threonine kinase inhibitor activity	IEP	HCCA
MF	GO:0005253	anion channel activity	IEP	HCCA
CC	GO:0005741	mitochondrial outer membrane	IEP	HCCA
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	HCCA
BP	GO:0006099	tricarboxylic acid cycle	IEP	HCCA
BP	GO:0006370	7-methylguanosine mRNA capping	IEP	HCCA
BP	GO:0007062	sister chromatid cohesion	IEP	HCCA
MF	GO:0008192	RNA guanylyltransferase activity	IEP	HCCA
MF	GO:0008308	voltage-gated anion channel activity	IEP	HCCA
BP	GO:0009452	7-methylguanosine RNA capping	IEP	HCCA
BP	GO:0010098	suspensor development	IEP	HCCA
BP	GO:0010212	response to ionizing radiation	IEP	HCCA
BP	GO:0010214	seed coat development	IEP	HCCA
BP	GO:0010222	stem vascular tissue pattern formation	IEP	HCCA
BP	GO:0010332	response to gamma radiation	IEP	HCCA
BP	GO:0010588	cotyledon vascular tissue pattern formation	IEP	HCCA
MF	GO:0019210	kinase inhibitor activity	IEP	HCCA
MF	GO:0030291	protein serine/threonine kinase inhibitor activity	IEP	HCCA
MF	GO:0030332	cyclin binding	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
BP	GO:0032200	telomere organization	IEP	HCCA
BP	GO:0032204	regulation of telomere maintenance	IEP	HCCA
BP	GO:0032504	multicellular organism reproduction	IEP	HCCA
BP	GO:0033043	regulation of organelle organization	IEP	HCCA
BP	GO:0033044	regulation of chromosome organization	IEP	HCCA
BP	GO:0036260	RNA capping	IEP	HCCA
MF	GO:0036440	citrate synthase activity	IEP	HCCA
CC	GO:0043073	germ cell nucleus	IEP	HCCA
BP	GO:0043247	telomere maintenance in response to DNA damage	IEP	HCCA
BP	GO:0045132	meiotic chromosome segregation	IEP	HCCA
MF	GO:0046912	acyltransferase, acyl groups converted into alkyl on transfer	IEP	HCCA
BP	GO:0048598	embryonic morphogenesis	IEP	HCCA
BP	GO:0048830	adventitious root development	IEP	HCCA
BP	GO:0051052	regulation of DNA metabolic process	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
MF	GO:0070568	guanylyltransferase activity	IEP	HCCA
BP	GO:0080159	zygote elongation	IEP	HCCA
BP	GO:0098813	nuclear chromosome segregation	IEP	HCCA
MF	GO:1990837	sequence-specific double-stranded DNA binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013187	F-box-assoc_dom_typ3	229	365
IPR001810	F-box_dom	22	59

External Links

PLAZA 3.0 Dicots	AT3G61340

AT3G61340

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation