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  5. AT3G62350

AT3G62350


Description : BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G71320.1); Has 136 Blast hits to 136 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).


Gene families : OG_01_0000183 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G62350
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AT1G12855 No alias F-box family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G12870 No alias F-box and associated interaction domains-containing protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G33530 No alias F-box family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G30385 No alias No description available 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G34280 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G62380 No alias CONTAINS InterPro DOMAIN/s: F-box associated interaction... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G17780 No alias F-box and associated interaction domains-containing protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003883 CTP synthase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
MF GO:0046910 pectinesterase inhibitor activity IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT3G62350