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IEPSearch (advanced) - BLAST
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- Species
- Arabidopsis thaliana
- Sequence
- AT4G00160
AT4G00160
Description : F-box/RNI-like/FBD-like domains-containing protein
Gene families : OG_01_0000027 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000027_tree
Expression Profile
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Co-expression Networks
Type Description Actions Neighborhood HRR: AT4G00160 Cluster HCCA: Cluster_40
Expression Context Conservation (ECC)
Target Alias Description ECC score Gene Family Method Actions AT1G50980 No alias F-box/RNI-like/FBD-like domains-containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci AT1G55030 No alias RNI-like superfamily protein 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci AT3G10750 No alias FBD domain family 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci AT3G12840 No alias unknown protein; Has 0 Blast hits to 0 proteins in 0... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci AT3G49020 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci AT3G49030 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci AT3G49040 No alias F-box/RNI-like superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci AT3G49045 No alias No description available 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci AT3G52690 No alias RNI-like superfamily protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci AT4G13965 No alias Protein with RNI-like/FBD-like domains 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci AT4G26350 No alias F-box/RNI-like/FBD-like domains-containing protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci AT5G38570 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci AT5G38590 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci AT5G40750 No alias FBD / Leucine Rich Repeat domains containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci AT5G44850 No alias Protein with RNI-like/FBD-like domains 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci AT5G52460 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci AT5G56325 No alias FBD-like domain family protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci AT5G56390 No alias F-box/RNI-like/FBD-like domains-containing protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci AT5G56400 No alias FBD, F-box, Skp2-like and Leucine Rich Repeat domains... 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci AT5G56410 No alias Protein with RNI-like/FBD-like domains 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci AT5G56430 No alias F-box/FBD-like domains containing protein 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci AT5G56440 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci AT5G56452 No alias FBD-like domain family protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci AT5G56560 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci AT5G56570 No alias Leucine-rich repeat (LRR) family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci AT5G56820 No alias F-box/RNI-like/FBD-like domains-containing protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci AT5G62970 No alias Protein with RNI-like/FBD-like domains 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Functional Annotation
Type GO Term Name Evidence Source MF GO:0003674 molecular_function ND Interproscan CC GO:0005575 cellular_component ND Interproscan BP GO:0008150 biological_process ND Interproscan Type GO Term Name Evidence Source BP GO:0000003 reproduction IEP HCCA BP GO:0000723 telomere maintenance IEP HCCA MF GO:0000976 transcription cis-regulatory region binding IEP HCCA MF GO:0000987 cis-regulatory region sequence-specific DNA binding IEP HCCA MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA CC GO:0001673 male germ cell nucleus IEP HCCA MF GO:0003909 DNA ligase activity IEP HCCA MF GO:0003910 DNA ligase (ATP) activity IEP HCCA MF GO:0004108 citrate (Si)-synthase activity IEP HCCA MF GO:0004484 mRNA guanylyltransferase activity IEP HCCA MF GO:0004860 protein kinase inhibitor activity IEP HCCA MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP HCCA MF GO:0005253 anion channel activity IEP HCCA CC GO:0005634 nucleus IEP HCCA CC GO:0005741 mitochondrial outer membrane IEP HCCA CC GO:0005815 microtubule organizing center IEP HCCA CC GO:0005876 spindle microtubule IEP HCCA CC GO:0005881 cytoplasmic microtubule IEP HCCA BP GO:0006099 tricarboxylic acid cycle IEP HCCA BP GO:0006259 DNA metabolic process IEP HCCA BP GO:0006266 DNA ligation IEP HCCA BP GO:0006310 DNA recombination IEP HCCA BP GO:0006370 7-methylguanosine mRNA capping IEP HCCA BP GO:0006626 protein targeting to mitochondrion IEP HCCA BP GO:0007059 chromosome segregation IEP HCCA BP GO:0007062 sister chromatid cohesion IEP HCCA BP GO:0007129 homologous chromosome pairing at meiosis IEP HCCA BP GO:0007131 reciprocal meiotic recombination IEP HCCA MF GO:0008192 RNA guanylyltransferase activity IEP HCCA MF GO:0008308 voltage-gated anion channel activity IEP HCCA BP GO:0009306 protein secretion IEP HCCA BP GO:0009452 7-methylguanosine RNA capping IEP HCCA CC GO:0009574 preprophase band IEP HCCA BP GO:0009652 thigmotropism IEP HCCA CC GO:0010005 cortical microtubule, transverse to long axis IEP HCCA BP GO:0010098 suspensor development IEP HCCA BP GO:0010212 response to ionizing radiation IEP HCCA BP GO:0010214 seed coat development IEP HCCA BP GO:0010222 stem vascular tissue pattern formation IEP HCCA BP GO:0010332 response to gamma radiation IEP HCCA BP GO:0010588 cotyledon vascular tissue pattern formation IEP HCCA MF GO:0016757 glycosyltransferase activity IEP HCCA MF GO:0016779 nucleotidyltransferase activity IEP HCCA MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA MF GO:0019210 kinase inhibitor activity IEP HCCA BP GO:0022402 cell cycle process IEP HCCA MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP HCCA MF GO:0030332 cyclin binding IEP HCCA BP GO:0032200 telomere organization IEP HCCA BP GO:0032204 regulation of telomere maintenance IEP HCCA BP GO:0032504 multicellular organism reproduction IEP HCCA BP GO:0033043 regulation of organelle organization IEP HCCA BP GO:0033044 regulation of chromosome organization IEP HCCA BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA BP GO:0035825 homologous recombination IEP HCCA BP GO:0036260 RNA capping IEP HCCA MF GO:0036440 citrate synthase activity IEP HCCA BP GO:0042138 meiotic DNA double-strand break formation IEP HCCA CC GO:0043073 germ cell nucleus IEP HCCA CC GO:0043226 organelle IEP HCCA CC GO:0043227 membrane-bounded organelle IEP HCCA CC GO:0043229 intracellular organelle IEP HCCA CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA BP GO:0043247 telomere maintenance in response to DNA damage IEP HCCA BP GO:0045132 meiotic chromosome segregation IEP HCCA MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP HCCA BP GO:0048598 embryonic morphogenesis IEP HCCA BP GO:0048830 adventitious root development IEP HCCA BP GO:0051052 regulation of DNA metabolic process IEP HCCA BP GO:0051128 regulation of cellular component organization IEP HCCA BP GO:0051276 chromosome organization IEP HCCA CC GO:0055028 cortical microtubule IEP HCCA BP GO:0061982 meiosis I cell cycle process IEP HCCA BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP HCCA MF GO:0070568 guanylyltransferase activity IEP HCCA BP GO:0070585 protein localization to mitochondrion IEP HCCA BP GO:0071692 protein localization to extracellular region IEP HCCA BP GO:0072655 establishment of protein localization to mitochondrion IEP HCCA BP GO:0080159 zygote elongation IEP HCCA BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA BP GO:0098813 nuclear chromosome segregation IEP HCCA CC GO:0110165 cellular anatomical entity IEP HCCA BP GO:0140527 reciprocal homologous recombination IEP HCCA BP GO:1903046 meiotic cell cycle process IEP HCCA MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA External LinksPLAZA 3.0 Dicots AT4G00160 Loading ... please wait ...