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AT4G00335


Description : RING-H2 finger B1A


Gene families : OG_01_0001143 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G00335
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Mp6g04810.1 No alias E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
BP GO:0048573 photoperiodism, flowering RCA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000309 nicotinamide-nucleotide adenylyltransferase activity IEP HCCA
BP GO:0000373 Group II intron splicing IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
MF GO:0004515 nicotinate-nucleotide adenylyltransferase activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
BP GO:0007033 vacuole organization IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009435 NAD biosynthetic process IEP HCCA
BP GO:0009685 gibberellin metabolic process IEP HCCA
BP GO:0009686 gibberellin biosynthetic process IEP HCCA
BP GO:0009787 regulation of abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009789 positive regulation of abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009967 positive regulation of signal transduction IEP HCCA
BP GO:0010029 regulation of seed germination IEP HCCA
BP GO:0010647 positive regulation of cell communication IEP HCCA
BP GO:0010942 positive regulation of cell death IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016101 diterpenoid metabolic process IEP HCCA
BP GO:0016102 diterpenoid biosynthetic process IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
BP GO:0023056 positive regulation of signaling IEP HCCA
BP GO:0034622 cellular protein-containing complex assembly IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0043068 positive regulation of programmed cell death IEP HCCA
BP GO:0043933 protein-containing complex subunit organization IEP HCCA
BP GO:0045926 negative regulation of growth IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
MF GO:0046982 protein heterodimerization activity IEP HCCA
BP GO:0048235 pollen sperm cell differentiation IEP HCCA
BP GO:0048584 positive regulation of response to stimulus IEP HCCA
BP GO:0051302 regulation of cell division IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:0097031 obsolete mitochondrial respiratory chain complex I biogenesis IEP HCCA
BP GO:0097034 obsolete mitochondrial respiratory chain complex IV biogenesis IEP HCCA
BP GO:1901419 regulation of response to alcohol IEP HCCA
BP GO:1905957 regulation of cellular response to alcohol IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 138 179
PLAZA 3.0 Dicots AT4G00335