- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : RHO guanyl-nucleotide exchange factor 3
Gene families : OG_01_0000318 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000318_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT4G00460 | |
| Cluster | HCCA: Cluster_256 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G55660 | No alias | ROP (rho of plants) guanine nucleotide exchange factor 6 | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004028 | 3-chloroallyl aldehyde dehydrogenase activity | IEP | HCCA |
| MF | GO:0004029 | aldehyde dehydrogenase (NAD+) activity | IEP | HCCA |
| MF | GO:0004030 | aldehyde dehydrogenase [NAD(P)+] activity | IEP | HCCA |
| MF | GO:0004650 | polygalacturonase activity | IEP | HCCA |
| CC | GO:0005773 | vacuole | IEP | HCCA |
| BP | GO:0006970 | response to osmotic stress | IEP | HCCA |
| MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
| BP | GO:0009269 | response to desiccation | IEP | HCCA |
| BP | GO:0009651 | response to salt stress | IEP | HCCA |
| BP | GO:0009719 | response to endogenous stimulus | IEP | HCCA |
| BP | GO:0009725 | response to hormone | IEP | HCCA |
| BP | GO:0009737 | response to abscisic acid | IEP | HCCA |
| BP | GO:0009787 | regulation of abscisic acid-activated signaling pathway | IEP | HCCA |
| BP | GO:0009789 | positive regulation of abscisic acid-activated signaling pathway | IEP | HCCA |
| BP | GO:0009962 | regulation of flavonoid biosynthetic process | IEP | HCCA |
| BP | GO:0009963 | positive regulation of flavonoid biosynthetic process | IEP | HCCA |
| BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
| BP | GO:0009967 | positive regulation of signal transduction | IEP | HCCA |
| BP | GO:0010033 | response to organic substance | IEP | HCCA |
| BP | GO:0010647 | positive regulation of cell communication | IEP | HCCA |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016805 | dipeptidase activity | IEP | HCCA |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
| BP | GO:0023051 | regulation of signaling | IEP | HCCA |
| BP | GO:0023056 | positive regulation of signaling | IEP | HCCA |
| BP | GO:0033993 | response to lipid | IEP | HCCA |
| MF | GO:0046982 | protein heterodimerization activity | IEP | HCCA |
| MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
| BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
| BP | GO:0048583 | regulation of response to stimulus | IEP | HCCA |
| BP | GO:0048584 | positive regulation of response to stimulus | IEP | HCCA |
| BP | GO:0097305 | response to alcohol | IEP | HCCA |
| BP | GO:1901419 | regulation of response to alcohol | IEP | HCCA |
| BP | GO:1905957 | regulation of cellular response to alcohol | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005512 | PRONE_dom | 104 | 319 |
| PLAZA 3.0 Dicots | AT4G00460 |