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  5. AT1G16940

AT1G16940


Description : F-box/RNI-like/FBD-like domains-containing protein


Gene families : OG_01_0000057 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000057_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G16940
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AT1G13780 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G32020 No alias F-box family protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G60400 No alias F-box/RNI-like superfamily protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G60410 No alias F-box family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G66290 No alias F-box/RNI-like superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G66320 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G66640 No alias RNI-like superfamily protein 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G78760 No alias F-box/RNI-like superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G23955 No alias F-box family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G13985 No alias FBD-associated F-box protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G18770 No alias F-box/FBD-like domains containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G22590 No alias Leucine Rich Repeat protein family 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G22600 No alias FBD / Leucine Rich Repeat domains containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G22720 No alias F-box/RNI-like superfamily protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G22730 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G53635 No alias F-box/RNI-like/FBD-like domains-containing protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G53637 No alias No description available 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G53840 No alias F-box/RNI-like/FBD-like domains-containing protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP HCCA
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006071 glycerol metabolic process IEP HCCA
MF GO:0008889 glycerophosphodiester phosphodiesterase activity IEP HCCA
MF GO:0015114 phosphate ion transmembrane transporter activity IEP HCCA
BP GO:0015858 nucleoside transport IEP HCCA
BP GO:0019400 alditol metabolic process IEP HCCA
CC GO:0022625 cytosolic large ribosomal subunit IEP HCCA
InterPro domains Description Start Stop
IPR006566 FBD 341 383
IPR001810 F-box_dom 13 47
PLAZA 3.0 Dicots AT1G16940