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AT4G02750


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0015283 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G02750
Cluster HCCA: Cluster_160


Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0004407 histone deacetylase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009292 genetic transfer IEP HCCA
BP GO:0009294 DNA mediated transformation IEP HCCA
BP GO:0009560 embryo sac egg cell differentiation IEP HCCA
MF GO:0019213 deacetylase activity IEP HCCA
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP HCCA
MF GO:0033558 protein deacetylase activity IEP HCCA
BP GO:0044764 multi-organism cellular process IEP HCCA
InterPro domains Description Start Stop
IPR032867 DYW_dom 647 771
IPR002885 Pentatricopeptide_repeat 127 156
IPR002885 Pentatricopeptide_repeat 189 212
IPR002885 Pentatricopeptide_repeat 313 342
IPR002885 Pentatricopeptide_repeat 220 248
IPR002885 Pentatricopeptide_repeat 375 404
IPR002885 Pentatricopeptide_repeat 549 572
IPR002885 Pentatricopeptide_repeat 96 125
IPR002885 Pentatricopeptide_repeat 344 372
IPR002885 Pentatricopeptide_repeat 282 311
IPR002885 Pentatricopeptide_repeat 159 187
IPR002885 Pentatricopeptide_repeat 67 92
IPR002885 Pentatricopeptide_repeat 473 521
IPR002885 Pentatricopeptide_repeat 249 275
PLAZA 3.0 Dicots AT4G02750