AT4G02950

Description : Ubiquitin family protein

Gene families : OG_01_0001041 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001041_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G02950

Target	Alias	Description	ECC score	Gene Family Method
AT4G03350	No alias	ubiquitin family protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G03370	No alias	Ubiquitin family protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G05230	No alias	Ubiquitin-like superfamily protein	0.1	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G05240	No alias	Ubiquitin-like superfamily protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G05250	No alias	Ubiquitin-like superfamily protein	0.08	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G05260	No alias	Ubiquitin-like superfamily protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G05270	No alias	Ubiquitin-like superfamily protein	0.07	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G05310	No alias	Ubiquitin-like superfamily protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0009292	genetic transfer	IEP	HCCA
BP	GO:0009294	DNA mediated transformation	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	HCCA
BP	GO:0044764	multi-organism cellular process	IEP	HCCA
BP	GO:0051704	multi-organism process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000626	Ubiquitin-like_dom	39	108

External Links

PLAZA 3.0 Dicots	AT4G02950