- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : RING/U-box superfamily protein
Gene families : OG_01_0009697 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT4G03000 | |
| Cluster | HCCA: Cluster_203 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000304 | response to singlet oxygen | IEP | HCCA |
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0004105 | choline-phosphate cytidylyltransferase activity | IEP | HCCA |
| MF | GO:0004439 | phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | IEP | HCCA |
| MF | GO:0004709 | MAP kinase kinase kinase activity | IEP | HCCA |
| MF | GO:0004843 | thiol-dependent deubiquitinase | IEP | HCCA |
| MF | GO:0004888 | transmembrane signaling receptor activity | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0006457 | protein folding | IEP | HCCA |
| BP | GO:0006656 | phosphatidylcholine biosynthetic process | IEP | HCCA |
| MF | GO:0008242 | omega peptidase activity | IEP | HCCA |
| BP | GO:0008284 | positive regulation of cell population proliferation | IEP | HCCA |
| BP | GO:0009314 | response to radiation | IEP | HCCA |
| BP | GO:0009416 | response to light stimulus | IEP | HCCA |
| CC | GO:0009526 | plastid envelope | IEP | HCCA |
| CC | GO:0009527 | plastid outer membrane | IEP | HCCA |
| BP | GO:0009648 | photoperiodism | IEP | HCCA |
| CC | GO:0009707 | chloroplast outer membrane | IEP | HCCA |
| BP | GO:0009903 | chloroplast avoidance movement | IEP | HCCA |
| BP | GO:0009904 | chloroplast accumulation movement | IEP | HCCA |
| CC | GO:0009941 | chloroplast envelope | IEP | HCCA |
| BP | GO:0010343 | singlet oxygen-mediated programmed cell death | IEP | HCCA |
| CC | GO:0019005 | SCF ubiquitin ligase complex | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | HCCA |
| CC | GO:0031301 | integral component of organelle membrane | IEP | HCCA |
| CC | GO:0031306 | intrinsic component of mitochondrial outer membrane | IEP | HCCA |
| CC | GO:0031307 | integral component of mitochondrial outer membrane | IEP | HCCA |
| CC | GO:0031967 | organelle envelope | IEP | HCCA |
| CC | GO:0031975 | envelope | IEP | HCCA |
| CC | GO:0032592 | integral component of mitochondrial membrane | IEP | HCCA |
| BP | GO:0032957 | inositol trisphosphate metabolic process | IEP | HCCA |
| MF | GO:0034593 | phosphatidylinositol bisphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0034595 | phosphatidylinositol phosphate 5-phosphatase activity | IEP | HCCA |
| BP | GO:0036473 | cell death in response to oxidative stress | IEP | HCCA |
| BP | GO:0042127 | regulation of cell population proliferation | IEP | HCCA |
| BP | GO:0042592 | homeostatic process | IEP | HCCA |
| BP | GO:0046164 | alcohol catabolic process | IEP | HCCA |
| BP | GO:0046174 | polyol catabolic process | IEP | HCCA |
| BP | GO:0046434 | organophosphate catabolic process | IEP | HCCA |
| BP | GO:0046470 | phosphatidylcholine metabolic process | IEP | HCCA |
| BP | GO:0046838 | phosphorylated carbohydrate dephosphorylation | IEP | HCCA |
| BP | GO:0046855 | inositol phosphate dephosphorylation | IEP | HCCA |
| BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
| BP | GO:0048522 | positive regulation of cellular process | IEP | HCCA |
| BP | GO:0048573 | photoperiodism, flowering | IEP | HCCA |
| BP | GO:0048878 | chemical homeostasis | IEP | HCCA |
| BP | GO:0050801 | ion homeostasis | IEP | HCCA |
| MF | GO:0052866 | phosphatidylinositol phosphate phosphatase activity | IEP | HCCA |
| BP | GO:0055063 | sulfate ion homeostasis | IEP | HCCA |
| BP | GO:0055072 | iron ion homeostasis | IEP | HCCA |
| BP | GO:0055081 | anion homeostasis | IEP | HCCA |
| MF | GO:0070567 | cytidylyltransferase activity | IEP | HCCA |
| BP | GO:0071484 | cellular response to light intensity | IEP | HCCA |
| BP | GO:0071486 | cellular response to high light intensity | IEP | HCCA |
| BP | GO:0071545 | inositol phosphate catabolic process | IEP | HCCA |
| BP | GO:0072505 | divalent inorganic anion homeostasis | IEP | HCCA |
| BP | GO:0097468 | programmed cell death in response to reactive oxygen species | IEP | HCCA |
| CC | GO:0098573 | intrinsic component of mitochondrial membrane | IEP | HCCA |
| BP | GO:0098771 | inorganic ion homeostasis | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| MF | GO:0106019 | phosphatidylinositol-4,5-bisphosphate phosphatase activity | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| BP | GO:1901616 | organic hydroxy compound catabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| PLAZA 3.0 Dicots | AT4G03000 |