AT4G04650

Description : RNA-directed DNA polymerase (reverse transcriptase)-related family protein

Gene families : OG_01_0000215 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000215_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G04650
Cluster	HCCA: Cluster_278

Target	Alias	Description	ECC score	Gene Family Method
AT1G45063	No alias	copper ion binding;electron carriers	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G25720	No alias	RNA-directed DNA polymerase (reverse...	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G28958	No alias	Cupredoxin superfamily protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
BP	GO:0001708	cell fate specification	RCA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009409	response to cold	IEP	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0010319	stromule	IDA	Interproscan
BP	GO:0032502	developmental process	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005739	mitochondrion	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR026960	RVT-Znf	111	195

External Links

PLAZA 3.0 Dicots	AT4G04650