AT4G05240

Description : Ubiquitin-like superfamily protein

Gene families : OG_01_0001041 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001041_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G05240
Cluster	HCCA: Cluster_73

Target	Alias	Description	ECC score	Gene Family Method
AT4G02950	No alias	Ubiquitin family protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G03350	No alias	ubiquitin family protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G03370	No alias	Ubiquitin family protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G05230	No alias	Ubiquitin-like superfamily protein	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G05250	No alias	Ubiquitin-like superfamily protein	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G05260	No alias	Ubiquitin-like superfamily protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G05310	No alias	Ubiquitin-like superfamily protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000156	phosphorelay response regulator activity	IEP	HCCA
MF	GO:0004044	amidophosphoribosyltransferase activity	IEP	HCCA
CC	GO:0005759	mitochondrial matrix	IEP	HCCA
BP	GO:0006144	purine nucleobase metabolic process	IEP	HCCA
BP	GO:0009112	nucleobase metabolic process	IEP	HCCA
BP	GO:0009113	purine nucleobase biosynthetic process	IEP	HCCA
BP	GO:0046112	nucleobase biosynthetic process	IEP	HCCA
MF	GO:0060089	molecular transducer activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000626	Ubiquitin-like_dom	65	128

External Links

PLAZA 3.0 Dicots	AT4G05240