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  5. AT4G05320

AT4G05320


Description : polyubiquitin 10


Gene families : OG_01_0000566 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000566_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G05320
Cluster HCCA: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
Mp3g22950.1 No alias ubiquitin-fold protein (UBQ) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_2470V3.1 No alias polyubiquitin 10 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_13865.1 No alias ubiquitin-fold protein (UBQ) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
BP GO:0006464 cellular protein modification process ISS Interproscan
BP GO:0006464 cellular protein modification process TAS Interproscan
BP GO:0007568 aging IEP Interproscan
BP GO:0009751 response to salicylic acid IEP Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0000165 MAPK cascade IEP HCCA
BP GO:0000302 response to reactive oxygen species IEP HCCA
BP GO:0000303 response to superoxide IEP HCCA
BP GO:0000305 response to oxygen radical IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
BP GO:0001101 response to acid chemical IEP HCCA
BP GO:0001676 long-chain fatty acid metabolic process IEP HCCA
BP GO:0002213 defense response to insect IEP HCCA
BP GO:0002682 regulation of immune system process IEP HCCA
BP GO:0002831 regulation of response to biotic stimulus IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003997 acyl-CoA oxidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004722 protein serine/threonine phosphatase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005483 soluble NSF attachment protein activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0005527 macrolide binding IEP HCCA
MF GO:0005528 FK506 binding IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005770 late endosome IEP HCCA
CC GO:0005773 vacuole IEP HCCA
CC GO:0005774 vacuolar membrane IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006498 N-terminal protein lipidation IEP HCCA
BP GO:0006499 N-terminal protein myristoylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006625 protein targeting to peroxisome IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 ion transport IEP HCCA
BP GO:0006812 cation transport IEP HCCA
BP GO:0006857 oligopeptide transport IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0006972 hyperosmotic response IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0006983 ER overload response IEP HCCA
BP GO:0006984 ER-nucleus signaling pathway IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008104 protein localization IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009269 response to desiccation IEP HCCA
BP GO:0009408 response to heat IEP HCCA
BP GO:0009414 response to water deprivation IEP HCCA
BP GO:0009415 response to water IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
CC GO:0009527 plastid outer membrane IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
CC GO:0009707 chloroplast outer membrane IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009723 response to ethylene IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009737 response to abscisic acid IEP HCCA
BP GO:0009738 abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009753 response to jasmonic acid IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
BP GO:0009788 negative regulation of abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009863 salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009867 jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0009873 ethylene-activated signaling pathway IEP HCCA
BP GO:0009937 regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009939 positive regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009967 positive regulation of signal transduction IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010193 response to ozone IEP HCCA
BP GO:0010260 animal organ senescence IEP HCCA
BP GO:0010325 raffinose family oligosaccharide biosynthetic process IEP HCCA
BP GO:0010351 lithium ion transport IEP HCCA
BP GO:0010363 regulation of plant-type hypersensitive response IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010647 positive regulation of cell communication IEP HCCA
BP GO:0010941 regulation of cell death IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015334 high-affinity oligopeptide transmembrane transporter activity IEP HCCA
BP GO:0015833 peptide transport IEP HCCA
BP GO:0015919 peroxisomal membrane transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016558 protein import into peroxisome matrix IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0018377 protein myristoylation IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0023056 positive regulation of signaling IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0030054 cell junction IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
BP GO:0030968 endoplasmic reticulum unfolded protein response IEP HCCA
CC GO:0031304 intrinsic component of mitochondrial inner membrane IEP HCCA
BP GO:0031347 regulation of defense response IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
BP GO:0032101 regulation of response to external stimulus IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
BP GO:0034613 cellular protein localization IEP HCCA
BP GO:0034976 response to endoplasmic reticulum stress IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
BP GO:0042126 nitrate metabolic process IEP HCCA
BP GO:0042128 nitrate assimilation IEP HCCA
BP GO:0042538 hyperosmotic salinity response IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0042886 amide transport IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:0042937 tripeptide transmembrane transporter activity IEP HCCA
BP GO:0042938 dipeptide transport IEP HCCA
BP GO:0042939 tripeptide transport IEP HCCA
BP GO:0043067 regulation of programmed cell death IEP HCCA
BP GO:0043069 negative regulation of programmed cell death IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0043574 peroxisomal transport IEP HCCA
BP GO:0043903 regulation of biological process involved in symbiotic interaction IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0045088 regulation of innate immune response IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0046967 cytosol to endoplasmic reticulum transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050776 regulation of immune response IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0060548 negative regulation of cell death IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0070542 response to fatty acid IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071216 cellular response to biotic stimulus IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0071941 nitrogen cycle metabolic process IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0072662 protein localization to peroxisome IEP HCCA
BP GO:0072663 establishment of protein localization to peroxisome IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0097305 response to alcohol IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
CC GO:0098573 intrinsic component of mitochondrial membrane IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901420 negative regulation of response to alcohol IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
BP GO:1905958 negative regulation of cellular response to alcohol IEP HCCA
BP GO:2001057 reactive nitrogen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 3 74
IPR000626 Ubiquitin-like_dom 231 302
IPR000626 Ubiquitin-like_dom 79 150
IPR000626 Ubiquitin-like_dom 155 226
IPR000626 Ubiquitin-like_dom 307 378
PLAZA 3.0 Dicots AT4G05320