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  5. AT4G09780

AT4G09780


Description : TRAF-like family protein


Gene families : OG_01_0000182 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000182_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G09780
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AT1G58270 No alias TRAF-like family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G04170 No alias TRAF-like family protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G04190 No alias TRAF-like family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G20370 No alias TRAF-like family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G20380 No alias TRAF-like family protein 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G46190 No alias TRAF-like family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G26290 No alias TRAF-like family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G26320 No alias TRAF-like family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0004805 trehalose-phosphatase activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006820 anion transport IEP HCCA
BP GO:0006824 cobalt ion transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0008272 sulfate transport IEP HCCA
MF GO:0008493 tetracycline transmembrane transporter activity IEP HCCA
MF GO:0008509 anion transmembrane transporter activity IEP HCCA
BP GO:0009960 endosperm development IEP HCCA
BP GO:0009962 regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0010101 post-embryonic root morphogenesis IEP HCCA
BP GO:0010102 lateral root morphogenesis IEP HCCA
BP GO:0010106 cellular response to iron ion starvation IEP HCCA
BP GO:0010197 polar nucleus fusion IEP HCCA
MF GO:0015075 ion transmembrane transporter activity IEP HCCA
MF GO:0015087 cobalt ion transmembrane transporter activity IEP HCCA
MF GO:0015099 nickel cation transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015114 phosphate ion transmembrane transporter activity IEP HCCA
MF GO:0015116 sulfate transmembrane transporter activity IEP HCCA
MF GO:0015665 alcohol transmembrane transporter activity IEP HCCA
BP GO:0015675 nickel cation transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0055068 cobalt ion homeostasis IEP HCCA
BP GO:0072348 sulfur compound transport IEP HCCA
MF GO:0080044 quercetin 7-O-glucosyltransferase activity IEP HCCA
BP GO:0080160 selenate transport IEP HCCA
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP HCCA
MF GO:1901682 sulfur compound transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 72 194
IPR002083 MATH/TRAF_dom 219 349
PLAZA 3.0 Dicots AT4G09780