AT4G11770

Description : Galactose oxidase/kelch repeat superfamily protein

Gene families : OG_01_0000018 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G11770
Cluster	HCCA: Cluster_324

Target	Alias	Description	ECC score	Gene Family Method
AT2G21680	No alias	Galactose oxidase/kelch repeat superfamily protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G29770	No alias	Galactose oxidase/kelch repeat superfamily protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G29780	No alias	Galactose oxidase/kelch repeat superfamily protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G29800	No alias	Galactose oxidase/kelch repeat superfamily protein	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G29810	No alias	Galactose oxidase/kelch repeat superfamily protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G29820	No alias	Galactose oxidase/kelch repeat superfamily protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G29830	No alias	Galactose oxidase/kelch repeat superfamily protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G09750	No alias	Galactose oxidase/kelch repeat superfamily protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G51250	No alias	Galactose oxidase/kelch repeat superfamily protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005737	cytoplasm	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006652	Kelch_1	187	230
IPR006652	Kelch_1	140	184
IPR001810	F-box_dom	15	53

External Links

PLAZA 3.0 Dicots	AT4G11770