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Description : F-box family protein with a domain of unknown function (DUF295)
Gene families : OG_01_0000101 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000101_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT4G12820 | |
| Cluster | HCCA: Cluster_74 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G10110 | No alias | F-box family protein | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G27580 | No alias | Protein of unknown function (DUF295) | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G67160 | No alias | F-box family protein with a domain of unknown function (DUF295) | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT2G03560 | No alias | F-box family protein with a domain of unknown function (DUF295) | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT2G03610 | No alias | F-box family protein | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT2G04810 | No alias | Protein of unknown function (DUF295) | 0.14 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT2G04830 | No alias | Protein of unknown function (DUF295) | 0.14 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT2G05970 | No alias | F-box family protein with a domain of unknown function (DUF295) | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT2G14500 | No alias | F-box family protein | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT2G33190 | No alias | F-box family protein with a domain of unknown function (DUF295) | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT4G10820 | No alias | F-box family protein | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT4G14165 | No alias | F-box family protein-related | 0.07 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT4G22060 | No alias | F-box family protein with a domain of unknown function (DUF295) | 0.07 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT4G22165 | No alias | F-box family protein with a domain of unknown function (DUF295) | 0.14 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT4G22170 | No alias | F-box family protein with a domain of unknown function (DUF295) | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G38270 | No alias | F-box family protein | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G66830 | No alias | F-box family protein with a domain of unknown function (DUF295) | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005215 | transporter activity | IEP | HCCA |
| MF | GO:0005337 | nucleoside transmembrane transporter activity | IEP | HCCA |
| MF | GO:0005351 | carbohydrate:proton symporter activity | IEP | HCCA |
| MF | GO:0005375 | copper ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0005402 | carbohydrate:cation symporter activity | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| CC | GO:0005887 | integral component of plasma membrane | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| MF | GO:0008324 | cation transmembrane transporter activity | IEP | HCCA |
| MF | GO:0008420 | RNA polymerase II CTD heptapeptide repeat phosphatase activity | IEP | HCCA |
| MF | GO:0008519 | ammonium transmembrane transporter activity | IEP | HCCA |
| BP | GO:0009555 | pollen development | IEP | HCCA |
| BP | GO:0010208 | pollen wall assembly | IEP | HCCA |
| BP | GO:0010584 | pollen exine formation | IEP | HCCA |
| BP | GO:0010927 | cellular component assembly involved in morphogenesis | IEP | HCCA |
| MF | GO:0015089 | high-affinity copper ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015095 | magnesium ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015114 | phosphate ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015144 | carbohydrate transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015145 | monosaccharide transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015398 | high-affinity secondary active ammonium transmembrane transporter activity | IEP | HCCA |
| BP | GO:0015695 | organic cation transport | IEP | HCCA |
| BP | GO:0015749 | monosaccharide transmembrane transport | IEP | HCCA |
| BP | GO:0015858 | nucleoside transport | IEP | HCCA |
| BP | GO:0018126 | protein hydroxylation | IEP | HCCA |
| BP | GO:0018401 | peptidyl-proline hydroxylation to 4-hydroxy-L-proline | IEP | HCCA |
| BP | GO:0019511 | peptidyl-proline hydroxylation | IEP | HCCA |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | HCCA |
| BP | GO:0034219 | carbohydrate transmembrane transport | IEP | HCCA |
| MF | GO:0051119 | sugar transmembrane transporter activity | IEP | HCCA |
| BP | GO:0070940 | dephosphorylation of RNA polymerase II C-terminal domain | IEP | HCCA |
| BP | GO:0072488 | ammonium transmembrane transport | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005174 | DUF295 | 354 | 405 |
| PLAZA 3.0 Dicots | AT4G12820 |