1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT4G13090

AT4G13090


Description : xyloglucan endotransglucosylase/hydrolase 2


Gene families : OG_01_0000050 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000050_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G13090

Target Alias Description ECC score Gene Family Method Actions
AT1G65310 No alias xyloglucan endotransglucosylase/hydrolase 17 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G14620 No alias xyloglucan endotransglucosylase/hydrolase 10 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G13080 No alias xyloglucan endotransglucosylase/hydrolase 1 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G25820 No alias xyloglucan endotransglucosylase/hydrolase 14 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G28850 No alias xyloglucan endotransglucosylase/hydrolase 26 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G57530 No alias xyloglucan endotransglucosylase/hydrolase 12 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G57540 No alias xyloglucan endotransglucosylase/hydrolase 13 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g02380.1 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g21490.1 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g10370.1 No alias Probable xyloglucan endotransglucosylase/hydrolase... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c16_20960V3.1 No alias xyloglucan endotransglucosylase/hydrolase 5 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c25_10500V3.1 No alias xyloglucan endotransglucosylase/hydrolase 5 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
MF GO:0016798 hydrolase activity, acting on glycosyl bonds ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005345 purine nucleobase transmembrane transporter activity IEP HCCA
BP GO:0009828 plant-type cell wall loosening IEP HCCA
MF GO:0015205 nucleobase transmembrane transporter activity IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0036294 cellular response to decreased oxygen levels IEP HCCA
MF GO:0050284 sinapate 1-glucosyltransferase activity IEP HCCA
BP GO:0071453 cellular response to oxygen levels IEP HCCA
BP GO:0071456 cellular response to hypoxia IEP HCCA
InterPro domains Description Start Stop
IPR000757 GH16 33 211
IPR010713 XET_C 242 288
PLAZA 3.0 Dicots AT4G13090