AT4G13280

Description : terpenoid synthase 12

Gene families : OG_01_0000165 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000165_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G13280
Cluster	HCCA: Cluster_143

Target	Alias	Description	ECC score	Gene Family Method
AT1G31950	No alias	Terpenoid cyclases/Protein prenyltransferases superfamily protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G33750	No alias	Terpenoid cyclases/Protein prenyltransferases superfamily protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G61680	No alias	terpene synthase 14	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G70080	No alias	Terpenoid cyclases/Protein prenyltransferases superfamily protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G24210	No alias	terpene synthase 10	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G14490	No alias	Terpenoid cyclases/Protein prenyltransferases superfamily protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G13300	No alias	terpenoid synthase 13	0.09	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005777	peroxisome	IDA	Interproscan
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006644	phospholipid metabolic process	None	Extended
BP	GO:0006714	sesquiterpenoid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009611	response to wounding	IEP	Interproscan
MF	GO:0009975	cyclase activity	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016106	sesquiterpenoid biosynthetic process	IDA	Interproscan
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
CC	GO:0042579	microbody	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0045338	farnesyl diphosphate metabolic process	IDA	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	HCCA
MF	GO:0004046	aminoacylase activity	IEP	HCCA
MF	GO:0005217	intracellular ligand-gated ion channel activity	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
BP	GO:0006811	ion transport	IEP	HCCA
BP	GO:0006812	cation transport	IEP	HCCA
BP	GO:0006874	cellular calcium ion homeostasis	IEP	HCCA
BP	GO:0009698	phenylpropanoid metabolic process	IEP	HCCA
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	HCCA
BP	GO:0009712	catechol-containing compound metabolic process	IEP	HCCA
BP	GO:0009713	catechol-containing compound biosynthetic process	IEP	HCCA
BP	GO:0009801	cinnamic acid ester metabolic process	IEP	HCCA
BP	GO:0009802	cinnamic acid ester biosynthetic process	IEP	HCCA
BP	GO:0010421	hydrogen peroxide-mediated programmed cell death	IEP	HCCA
BP	GO:0010583	response to cyclopentenone	IEP	HCCA
MF	GO:0015112	nitrate transmembrane transporter activity	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016706	2-oxoglutarate-dependent dioxygenase activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0019825	oxygen binding	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
BP	GO:0036294	cellular response to decreased oxygen levels	IEP	HCCA
BP	GO:0036473	cell death in response to oxidative stress	IEP	HCCA
BP	GO:0036474	cell death in response to hydrogen peroxide	IEP	HCCA
BP	GO:0048527	lateral root development	IEP	HCCA
BP	GO:0048528	post-embryonic root development	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA
BP	GO:0071453	cellular response to oxygen levels	IEP	HCCA
BP	GO:0071456	cellular response to hypoxia	IEP	HCCA
MF	GO:0090430	caffeoyl-CoA: alcohol caffeoyl transferase activity	IEP	HCCA
BP	GO:0090431	alkyl caffeate ester biosynthetic process	IEP	HCCA
BP	GO:0090696	post-embryonic plant organ development	IEP	HCCA
BP	GO:0097468	programmed cell death in response to reactive oxygen species	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001906	Terpene_synth_N	22	199
IPR005630	Terpene_synthase_metal-bd	394	465
IPR005630	Terpene_synthase_metal-bd	230	389

External Links

PLAZA 3.0 Dicots	AT4G13280

AT4G13280

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation