AT4G13480

Description : myb domain protein 79

Gene families : OG_01_0000592 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G13480
Cluster	HCCA: Cluster_21

Target	Alias	Description	ECC score	Gene Family Method
AT1G25340	No alias	myb domain protein 116	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G68320	No alias	myb domain protein 62	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G06490	No alias	myb domain protein 108	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G46130	No alias	myb domain protein 48	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	IEP	HCCA
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	HCCA
BP	GO:0006012	galactose metabolic process	IEP	HCCA
BP	GO:0006817	phosphate ion transport	IEP	HCCA
BP	GO:0006863	purine nucleobase transport	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
MF	GO:0008378	galactosyltransferase activity	IEP	HCCA
BP	GO:0009414	response to water deprivation	IEP	HCCA
BP	GO:0009415	response to water	IEP	HCCA
BP	GO:0009688	abscisic acid biosynthetic process	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0009733	response to auxin	IEP	HCCA
BP	GO:0009737	response to abscisic acid	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
BP	GO:0010252	auxin homeostasis	IEP	HCCA
MF	GO:0010279	indole-3-acetic acid amido synthetase activity	IEP	HCCA
MF	GO:0010436	carotenoid dioxygenase activity	IEP	HCCA
BP	GO:0010583	response to cyclopentenone	IEP	HCCA
BP	GO:0015851	nucleobase transport	IEP	HCCA
BP	GO:0016114	terpenoid biosynthetic process	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	HCCA
MF	GO:0016881	acid-amino acid ligase activity	IEP	HCCA
BP	GO:0033993	response to lipid	IEP	HCCA
MF	GO:0035250	UDP-galactosyltransferase activity	IEP	HCCA
BP	GO:0043289	apocarotenoid biosynthetic process	IEP	HCCA
MF	GO:0045543	gibberellin 2-beta-dioxygenase activity	IEP	HCCA
MF	GO:0045549	9-cis-epoxycarotenoid dioxygenase activity	IEP	HCCA
MF	GO:0047216	inositol 3-alpha-galactosyltransferase activity	IEP	HCCA
BP	GO:0048446	petal morphogenesis	IEP	HCCA
MF	GO:0050403	trans-zeatin O-beta-D-glucosyltransferase activity	IEP	HCCA
MF	GO:0050502	cis-zeatin O-beta-D-glucosyltransferase activity	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA
MF	GO:0052635	C-20 gibberellin 2-beta-dioxygenase activity	IEP	HCCA
MF	GO:0080103	4-methylthiopropyl glucosinolate S-oxygenase activity	IEP	HCCA
MF	GO:0080107	8-methylthiopropyl glucosinolate S-oxygenase activity	IEP	HCCA
BP	GO:0097305	response to alcohol	IEP	HCCA
BP	GO:1902645	tertiary alcohol biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	61	105
IPR001005	SANT/Myb	8	55

External Links

PLAZA 3.0 Dicots	AT4G13480

AT4G13480

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation