AT4G13510


Description : ammonium transporter 1;1


Gene families : OG_01_0000238 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000238_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G13510
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AT3G24290 No alias ammonium transporter 1;5 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G24300 No alias ammonium transporter 1;3 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g08310.1 No alias ammonium transporter (AMT1) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_18430V3.1 No alias ammonium transporter 1;1 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3s397_40V3.1 No alias ammonium transporter 1;2 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
BP GO:0001666 response to hypoxia RCA Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0006612 protein targeting to membrane RCA Interproscan
BP GO:0006810 transport ISS Interproscan
BP GO:0006820 anion transport RCA Interproscan
BP GO:0006862 nucleotide transport RCA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport RCA Interproscan
MF GO:0008519 ammonium transmembrane transporter activity IDA Interproscan
MF GO:0008519 ammonium transmembrane transporter activity IMP Interproscan
MF GO:0008519 ammonium transmembrane transporter activity ISS Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
BP GO:0009737 response to abscisic acid IDA Interproscan
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway RCA Interproscan
BP GO:0010310 regulation of hydrogen peroxide metabolic process RCA Interproscan
BP GO:0010311 lateral root formation IMP Interproscan
BP GO:0010363 regulation of plant-type hypersensitive response RCA Interproscan
BP GO:0015695 organic cation transport IMP Interproscan
BP GO:0015802 basic amino acid transport RCA Interproscan
CC GO:0016020 membrane ISS Interproscan
BP GO:0031347 regulation of defense response RCA Interproscan
BP GO:0043069 negative regulation of programmed cell death RCA Interproscan
BP GO:0043090 amino acid import RCA Interproscan
BP GO:0043269 regulation of ion transport RCA Interproscan
BP GO:0051258 protein polymerization IDA Interproscan
BP GO:0080167 response to karrikin IEP Interproscan
BP GO:0080181 lateral root branching IMP Interproscan
Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade IEP HCCA
MF GO:0000224 peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity IEP HCCA
BP GO:0000302 response to reactive oxygen species IEP HCCA
BP GO:0002218 activation of innate immune response IEP HCCA
BP GO:0002237 response to molecule of bacterial origin IEP HCCA
BP GO:0002252 immune effector process IEP HCCA
BP GO:0002253 activation of immune response IEP HCCA
BP GO:0002376 immune system process IEP HCCA
BP GO:0002679 respiratory burst involved in defense response IEP HCCA
BP GO:0002684 positive regulation of immune system process IEP HCCA
BP GO:0002833 positive regulation of response to biotic stimulus IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004708 MAP kinase kinase activity IEP HCCA
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006355 regulation of transcription, DNA-templated IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP HCCA
BP GO:0006857 oligopeptide transport IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006955 immune response IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0006995 cellular response to nitrogen starvation IEP HCCA
BP GO:0007154 cell communication IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008219 cell death IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009267 cellular response to starvation IEP HCCA
BP GO:0009403 toxin biosynthetic process IEP HCCA
BP GO:0009409 response to cold IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009595 detection of biotic stimulus IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
BP GO:0009625 response to insect IEP HCCA
BP GO:0009627 systemic acquired resistance IEP HCCA
BP GO:0009636 response to toxic substance IEP HCCA
BP GO:0009696 salicylic acid metabolic process IEP HCCA
BP GO:0009697 salicylic acid biosynthetic process IEP HCCA
BP GO:0009700 indole phytoalexin biosynthetic process IEP HCCA
BP GO:0009738 abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009751 response to salicylic acid IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
BP GO:0009759 indole glucosinolate biosynthetic process IEP HCCA
BP GO:0009812 flavonoid metabolic process IEP HCCA
BP GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0009867 jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010120 camalexin biosynthetic process IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
BP GO:0010188 response to microbial phytotoxin IEP HCCA
BP GO:0010193 response to ozone IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0010306 rhamnogalacturonan II biosynthetic process IEP HCCA
BP GO:0010374 stomatal complex development IEP HCCA
BP GO:0010396 rhamnogalacturonan II metabolic process IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
BP GO:0010942 positive regulation of cell death IEP HCCA
BP GO:0012501 programmed cell death IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
MF GO:0015112 nitrate transmembrane transporter activity IEP HCCA
BP GO:0015706 nitrate transport IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015833 peptide transport IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016143 S-glycoside metabolic process IEP HCCA
BP GO:0016144 S-glycoside biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0018958 phenol-containing compound metabolic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0019757 glycosinolate metabolic process IEP HCCA
BP GO:0019758 glycosinolate biosynthetic process IEP HCCA
BP GO:0019760 glucosinolate metabolic process IEP HCCA
BP GO:0019761 glucosinolate biosynthetic process IEP HCCA
MF GO:0030151 molybdenum ion binding IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0030968 endoplasmic reticulum unfolded protein response IEP HCCA
BP GO:0031056 regulation of histone modification IEP HCCA
BP GO:0031063 regulation of histone deacetylation IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0031348 negative regulation of defense response IEP HCCA
BP GO:0031349 positive regulation of defense response IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0031667 response to nutrient levels IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
BP GO:0032103 positive regulation of response to external stimulus IEP HCCA
BP GO:0032268 regulation of cellular protein metabolic process IEP HCCA
BP GO:0032270 positive regulation of cellular protein metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034250 positive regulation of cellular amide metabolic process IEP HCCA
BP GO:0034976 response to endoplasmic reticulum stress IEP HCCA
MF GO:0035252 UDP-xylosyltransferase activity IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042126 nitrate metabolic process IEP HCCA
BP GO:0042128 nitrate assimilation IEP HCCA
MF GO:0042285 xylosyltransferase activity IEP HCCA
BP GO:0042343 indole glucosinolate metabolic process IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0042435 indole-containing compound biosynthetic process IEP HCCA
BP GO:0042537 benzene-containing compound metabolic process IEP HCCA
BP GO:0042542 response to hydrogen peroxide IEP HCCA
BP GO:0042594 response to starvation IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0042886 amide transport IEP HCCA
BP GO:0043068 positive regulation of programmed cell death IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043545 molybdopterin cofactor metabolic process IEP HCCA
BP GO:0043562 cellular response to nitrogen levels IEP HCCA
BP GO:0043900 obsolete regulation of multi-organism process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0044550 secondary metabolite biosynthetic process IEP HCCA
BP GO:0045087 innate immune response IEP HCCA
BP GO:0045089 positive regulation of innate immune response IEP HCCA
BP GO:0045489 pectin biosynthetic process IEP HCCA
BP GO:0045727 positive regulation of translation IEP HCCA
BP GO:0045730 respiratory burst IEP HCCA
BP GO:0045892 negative regulation of transcription, DNA-templated IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0046189 phenol-containing compound biosynthetic process IEP HCCA
BP GO:0046217 indole phytoalexin metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046777 protein autophosphorylation IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0048585 negative regulation of response to stimulus IEP HCCA
BP GO:0050778 positive regulation of immune response IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0051093 negative regulation of developmental process IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051189 prosthetic group metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051247 positive regulation of protein metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051253 negative regulation of RNA metabolic process IEP HCCA
BP GO:0051606 detection of stimulus IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0051865 protein autoubiquitination IEP HCCA
BP GO:0052314 phytoalexin metabolic process IEP HCCA
BP GO:0052315 phytoalexin biosynthetic process IEP HCCA
BP GO:0052317 camalexin metabolic process IEP HCCA
BP GO:0052325 cell wall pectin biosynthetic process IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071941 nitrogen cycle metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0090311 regulation of protein deacetylation IEP HCCA
BP GO:0090558 plant epidermis development IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1900055 regulation of leaf senescence IEP HCCA
BP GO:1900056 negative regulation of leaf senescence IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
BP GO:1901659 glycosyl compound biosynthetic process IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1902679 negative regulation of RNA biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2001057 reactive nitrogen species metabolic process IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR024041 NH4_transpt_AmtB-like_dom 45 467
PLAZA 3.0 Dicots AT4G13510