1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT4G13600

AT4G13600


Description : Carbohydrate-binding X8 domain superfamily protein


Gene families : OG_01_0000099 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000099_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G13600
Cluster HCCA: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
AT1G69295 No alias plasmodesmata callose-binding protein 4 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G63240 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G63250 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
BP GO:0006355 regulation of transcription, DNA-templated IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0010065 primary meristem tissue development IEP HCCA
BP GO:0010067 procambium histogenesis IEP HCCA
BP GO:0010087 phloem or xylem histogenesis IEP HCCA
BP GO:0010226 response to lithium ion IEP HCCA
BP GO:0010229 inflorescence development IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0045893 positive regulation of transcription, DNA-templated IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0048507 meristem development IEP HCCA
BP GO:0048508 embryonic meristem development IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR012946 X8 61 130
PLAZA 3.0 Dicots AT4G13600