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  5. AT4G15420

AT4G15420


Description : Ubiquitin fusion degradation UFD1 family protein


Gene families : OG_01_0007285 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0007285_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G15420
Cluster HCCA: Cluster_260

Target Alias Description ECC score Gene Family Method Actions
Mp1g04760.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_2100V3.1 No alias Ubiquitin fusion degradation UFD1 family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
BP GO:0000302 response to reactive oxygen species IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0004605 phosphatidate cytidylyltransferase activity IEP HCCA
MF GO:0004619 phosphoglycerate mutase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP HCCA
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0006879 cellular iron ion homeostasis IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009408 response to heat IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009644 response to high light intensity IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010286 heat acclimation IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0030148 sphingolipid biosynthetic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042542 response to hydrogen peroxide IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043335 protein unfolding IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
MF GO:0045140 inositol phosphoceramide synthase activity IEP HCCA
MF GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
MF GO:0070300 phosphatidic acid binding IEP HCCA
MF GO:0070567 cytidylyltransferase activity IEP HCCA
BP GO:0080148 negative regulation of response to water deprivation IEP HCCA
BP GO:0080186 developmental vegetative growth IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:2000070 regulation of response to water deprivation IEP HCCA
InterPro domains Description Start Stop
IPR004854 Ufd1-like 90 251
PLAZA 3.0 Dicots AT4G15420