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  5. AT4G15520

AT4G15520


Description : tRNA/rRNA methyltransferase (SpoU) family protein


Gene families : OG_01_0005208 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005208_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G15520
Cluster HCCA: Cluster_117


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0006396 RNA processing ISS Interproscan
BP GO:0006635 fatty acid beta-oxidation RCA Interproscan
MF GO:0008173 RNA methyltransferase activity ISS Interproscan
BP GO:0016558 protein import into peroxisome matrix RCA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005731 nucleolus organizer region IEP HCCA
MF GO:0008327 methyl-CpG binding IEP HCCA
CC GO:0010369 chromocenter IEP HCCA
CC GO:0010370 perinucleolar chromocenter IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
CC GO:0030874 nucleolar chromatin IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0043621 protein self-association IEP HCCA
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001537 SpoU_MeTrfase 7 144
PLAZA 3.0 Dicots AT4G15520