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  5. AT4G16610

AT4G16610


Description : C2H2-like zinc finger protein


Gene families : OG_01_0000119 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G16610
Cluster HCCA: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
AT2G17180 No alias C2H2-like zinc finger protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G28710 No alias C2H2-type zinc finger family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0001708 cell fate specification IEP HCCA
BP GO:0003002 regionalization IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004871 obsolete signal transducer activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006949 syncytium formation IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
BP GO:0009411 response to UV IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0009860 pollen tube growth IEP HCCA
BP GO:0009886 post-embryonic animal morphogenesis IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0009900 dehiscence IEP HCCA
BP GO:0009908 flower development IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0009911 positive regulation of flower development IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0010047 fruit dehiscence IEP HCCA
BP GO:0010048 vernalization response IEP HCCA
BP GO:0010093 specification of floral organ identity IEP HCCA
BP GO:0010311 lateral root formation IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0019722 calcium-mediated signaling IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043473 pigmentation IEP HCCA
BP GO:0043476 pigment accumulation IEP HCCA
BP GO:0043478 pigment accumulation in response to UV light IEP HCCA
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP HCCA
BP GO:0043480 pigment accumulation in tissues IEP HCCA
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0048367 shoot system development IEP HCCA
BP GO:0048437 floral organ development IEP HCCA
BP GO:0048440 carpel development IEP HCCA
BP GO:0048441 petal development IEP HCCA
BP GO:0048443 stamen development IEP HCCA
BP GO:0048481 plant ovule development IEP HCCA
BP GO:0048507 meristem development IEP HCCA
BP GO:0048580 regulation of post-embryonic development IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048608 reproductive structure development IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048731 system development IEP HCCA
BP GO:0048827 phyllome development IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0048832 specification of plant organ number IEP HCCA
BP GO:0048833 specification of floral organ number IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051645 Golgi localization IEP HCCA
BP GO:0051646 mitochondrion localization IEP HCCA
BP GO:0060151 peroxisome localization IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0080154 regulation of fertilization IEP HCCA
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP HCCA
BP GO:0090567 reproductive shoot system development IEP HCCA
BP GO:0090701 specification of plant organ identity IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
BP GO:2000243 positive regulation of reproductive process IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT4G16610