AT4G16890

Description : disease resistance protein (TIR-NBS-LRR class), putative

Gene families : OG_01_0000012 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000012_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G16890
Cluster	HCCA: Cluster_94

Target	Alias	Description	ECC score	Gene Family Method
AT1G56540	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G57630	No alias	Toll-Interleukin-Resistance (TIR) domain family protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G57650	No alias	ATP binding	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G64070	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G65850	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.09	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G66090	No alias	Disease resistance protein (TIR-NBS class)	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G17055	No alias	Toll-Interleukin-Resistance (TIR) domain family protein	0.12	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G04220	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G25505	No alias	No description available	0.12	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G25510	No alias	disease resistance protein (TIR-NBS-LRR class), putative	0.17	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G08450	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.11	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G09360	No alias	NB-ARC domain-containing disease resistance protein	0.09	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G11170	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.09	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G14370	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G16857	No alias	No description available	0.07	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G16900	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G16920	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.1	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G16960	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G17970	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G18350	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.07	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G18370	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.07	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G22690	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38340	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38344	No alias	Toll-Interleukin-Resistance (TIR) domain family protein	0.11	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38350	No alias	Disease resistance protein (NBS-LRR class) family	0.12	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G41740	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G44510	No alias	target of AVRB operation1	0.11	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G46510	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G49140	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.07	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G51630	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.09	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	ISS	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005737	cytoplasm	IDA	Interproscan
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	ISS	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IGI	Interproscan
BP	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway	IMP	Interproscan
BP	GO:0009863	salicylic acid mediated signaling pathway	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042742	defense response to bacterium	IMP	Interproscan
BP	GO:0042742	defense response to bacterium	IGI	Interproscan
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	IDA	Interproscan
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000023	maltose metabolic process	IEP	HCCA
CC	GO:0000139	Golgi membrane	IEP	HCCA
BP	GO:0000165	MAPK cascade	IEP	HCCA
BP	GO:0002239	response to oomycetes	IEP	HCCA
BP	GO:0002376	immune system process	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0003849	3-deoxy-7-phosphoheptulonate synthase activity	IEP	HCCA
MF	GO:0003951	NAD+ kinase activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0004674	protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0004675	transmembrane receptor protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0005350	pyrimidine nucleobase transmembrane transporter activity	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
BP	GO:0006071	glycerol metabolic process	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006498	N-terminal protein lipidation	IEP	HCCA
BP	GO:0006499	N-terminal protein myristoylation	IEP	HCCA
BP	GO:0006884	cell volume homeostasis	IEP	HCCA
BP	GO:0006955	immune response	IEP	HCCA
BP	GO:0007166	cell surface receptor signaling pathway	IEP	HCCA
BP	GO:0007167	enzyme linked receptor protein signaling pathway	IEP	HCCA
BP	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	IEP	HCCA
BP	GO:0008219	cell death	IEP	HCCA
MF	GO:0008889	glycerophosphodiester phosphodiesterase activity	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
BP	GO:0009423	chorismate biosynthetic process	IEP	HCCA
BP	GO:0009626	plant-type hypersensitive response	IEP	HCCA
MF	GO:0009815	1-aminocyclopropane-1-carboxylate oxidase activity	IEP	HCCA
BP	GO:0009992	cellular water homeostasis	IEP	HCCA
BP	GO:0012501	programmed cell death	IEP	HCCA
MF	GO:0015210	uracil transmembrane transporter activity	IEP	HCCA
MF	GO:0015391	nucleobase:cation symporter activity	IEP	HCCA
MF	GO:0015505	uracil:cation symporter activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
BP	GO:0016556	mRNA modification	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
BP	GO:0018377	protein myristoylation	IEP	HCCA
MF	GO:0019199	transmembrane receptor protein kinase activity	IEP	HCCA
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	HCCA
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0019400	alditol metabolic process	IEP	HCCA
MF	GO:0019825	oxygen binding	IEP	HCCA
MF	GO:0019904	protein domain specific binding	IEP	HCCA
BP	GO:0030104	water homeostasis	IEP	HCCA
MF	GO:0030275	LRR domain binding	IEP	HCCA
BP	GO:0031348	negative regulation of defense response	IEP	HCCA
BP	GO:0031365	N-terminal protein amino acid modification	IEP	HCCA
MF	GO:0031625	ubiquitin protein ligase binding	IEP	HCCA
BP	GO:0034050	programmed cell death induced by symbiont	IEP	HCCA
BP	GO:0035303	regulation of dephosphorylation	IEP	HCCA
BP	GO:0035304	regulation of protein dephosphorylation	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043650	dicarboxylic acid biosynthetic process	IEP	HCCA
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	HCCA
BP	GO:0044403	biological process involved in symbiotic interaction	IEP	HCCA
BP	GO:0045087	innate immune response	IEP	HCCA
BP	GO:0046417	chorismate metabolic process	IEP	HCCA
BP	GO:0046777	protein autophosphorylation	IEP	HCCA
BP	GO:0051607	defense response to virus	IEP	HCCA
BP	GO:0051702	biological process involved in interaction with symbiont	IEP	HCCA
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	HCCA
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0140546	defense response to symbiont	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000157	TIR_dom	12	185
IPR002182	NB-ARC	187	421
IPR011713	Leu-rich_rpt_3	591	609
IPR011713	Leu-rich_rpt_3	752	770

External Links

PLAZA 3.0 Dicots	AT4G16890

AT4G16890

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation