AT4G16940

Description : Disease resistance protein (TIR-NBS-LRR class) family

Gene families : OG_01_0000012 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000012_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G16940
Cluster	HCCA: Cluster_21

Target	Alias	Description	ECC score	Gene Family Method
AT1G72860	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G16930	No alias	Toll-Interleukin-Resistance (TIR) domain-containing protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G16957	No alias	No description available	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G17680	No alias	disease resistance protein (TIR-NBS-LRR class), putative	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38340	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G40090	No alias	Disease resistance protein (TIR-NBS class)	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G40100	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G49140	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005739	mitochondrion	IDA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0009927	histidine phosphotransfer kinase activity	IEP	HCCA
BP	GO:0048445	carpel morphogenesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011713	Leu-rich_rpt_3	566	585
IPR011713	Leu-rich_rpt_3	698	718
IPR000157	TIR_dom	4	134
IPR002182	NB-ARC	147	369

External Links

PLAZA 3.0 Dicots	AT4G16940