AT4G17090

Description : chloroplast beta-amylase

Gene families : OG_01_0001356 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001356_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G17090
Cluster	HCCA: Cluster_67

Type	GO Term	Name	Evidence	Source
BP	GO:0000023	maltose metabolic process	None	Extended
BP	GO:0000024	maltose biosynthetic process	IMP	Interproscan
BP	GO:0000272	polysaccharide catabolic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0005982	starch metabolic process	None	Extended
BP	GO:0005983	starch catabolic process	IMP	Interproscan
BP	GO:0005983	starch catabolic process	TAS	Interproscan
BP	GO:0005984	disaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009251	glucan catabolic process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009311	oligosaccharide metabolic process	None	Extended
BP	GO:0009312	oligosaccharide biosynthetic process	None	Extended
BP	GO:0009409	response to cold	IEP	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009536	plastid	None	Extended
CC	GO:0009570	chloroplast stroma	IDA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
MF	GO:0016160	amylase activity	None	Extended
MF	GO:0016161	beta-amylase activity	IDA	Interproscan
MF	GO:0016161	beta-amylase activity	ISS	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044247	cellular polysaccharide catabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0044275	cellular carbohydrate catabolic process	None	Extended
BP	GO:0046351	disaccharide biosynthetic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000165	MAPK cascade	IEP	HCCA
BP	GO:0001101	response to acid chemical	IEP	HCCA
MF	GO:0004310	farnesyl-diphosphate farnesyltransferase activity	IEP	HCCA
MF	GO:0004311	farnesyltranstransferase activity	IEP	HCCA
MF	GO:0004512	inositol-3-phosphate synthase activity	IEP	HCCA
MF	GO:0004659	prenyltransferase activity	IEP	HCCA
MF	GO:0004805	trehalose-phosphatase activity	IEP	HCCA
MF	GO:0004857	enzyme inhibitor activity	IEP	HCCA
MF	GO:0004866	endopeptidase inhibitor activity	IEP	HCCA
MF	GO:0004867	serine-type endopeptidase inhibitor activity	IEP	HCCA
MF	GO:0004869	cysteine-type endopeptidase inhibitor activity	IEP	HCCA
BP	GO:0005991	trehalose metabolic process	IEP	HCCA
BP	GO:0005992	trehalose biosynthetic process	IEP	HCCA
BP	GO:0006020	inositol metabolic process	IEP	HCCA
BP	GO:0006021	inositol biosynthetic process	IEP	HCCA
BP	GO:0006658	phosphatidylserine metabolic process	IEP	HCCA
BP	GO:0006659	phosphatidylserine biosynthetic process	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
BP	GO:0006972	hyperosmotic response	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
BP	GO:0007568	aging	IEP	HCCA
BP	GO:0007623	circadian rhythm	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
MF	GO:0008378	galactosyltransferase activity	IEP	HCCA
BP	GO:0009269	response to desiccation	IEP	HCCA
BP	GO:0009414	response to water deprivation	IEP	HCCA
BP	GO:0009415	response to water	IEP	HCCA
CC	GO:0009526	plastid envelope	IEP	HCCA
CC	GO:0009527	plastid outer membrane	IEP	HCCA
BP	GO:0009607	response to biotic stimulus	IEP	HCCA
BP	GO:0009617	response to bacterium	IEP	HCCA
BP	GO:0009620	response to fungus	IEP	HCCA
BP	GO:0009631	cold acclimation	IEP	HCCA
BP	GO:0009644	response to high light intensity	IEP	HCCA
CC	GO:0009707	chloroplast outer membrane	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0009737	response to abscisic acid	IEP	HCCA
CC	GO:0009941	chloroplast envelope	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010150	leaf senescence	IEP	HCCA
BP	GO:0010310	regulation of hydrogen peroxide metabolic process	IEP	HCCA
BP	GO:0010466	negative regulation of peptidase activity	IEP	HCCA
BP	GO:0010951	negative regulation of endopeptidase activity	IEP	HCCA
MF	GO:0015112	nitrate transmembrane transporter activity	IEP	HCCA
BP	GO:0016143	S-glycoside metabolic process	IEP	HCCA
BP	GO:0016144	S-glycoside biosynthetic process	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016837	carbon-oxygen lyase activity, acting on polysaccharides	IEP	HCCA
MF	GO:0016872	intramolecular lyase activity	IEP	HCCA
MF	GO:0019203	carbohydrate phosphatase activity	IEP	HCCA
BP	GO:0019220	regulation of phosphate metabolic process	IEP	HCCA
BP	GO:0019757	glycosinolate metabolic process	IEP	HCCA
BP	GO:0019758	glycosinolate biosynthetic process	IEP	HCCA
BP	GO:0019760	glucosinolate metabolic process	IEP	HCCA
BP	GO:0019761	glucosinolate biosynthetic process	IEP	HCCA
BP	GO:0030162	regulation of proteolysis	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
MF	GO:0030570	pectate lyase activity	IEP	HCCA
BP	GO:0031399	regulation of protein modification process	IEP	HCCA
BP	GO:0031647	regulation of protein stability	IEP	HCCA
BP	GO:0032268	regulation of cellular protein metabolic process	IEP	HCCA
MF	GO:0033612	receptor serine/threonine kinase binding	IEP	HCCA
BP	GO:0033993	response to lipid	IEP	HCCA
MF	GO:0035250	UDP-galactosyltransferase activity	IEP	HCCA
BP	GO:0035303	regulation of dephosphorylation	IEP	HCCA
BP	GO:0035304	regulation of protein dephosphorylation	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
BP	GO:0042538	hyperosmotic salinity response	IEP	HCCA
BP	GO:0043207	response to external biotic stimulus	IEP	HCCA
BP	GO:0044272	sulfur compound biosynthetic process	IEP	HCCA
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	HCCA
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	HCCA
BP	GO:0045037	protein import into chloroplast stroma	IEP	HCCA
BP	GO:0045861	negative regulation of proteolysis	IEP	HCCA
MF	GO:0047216	inositol 3-alpha-galactosyltransferase activity	IEP	HCCA
MF	GO:0047746	chlorophyllase activity	IEP	HCCA
BP	GO:0048511	rhythmic process	IEP	HCCA
BP	GO:0050821	protein stabilization	IEP	HCCA
BP	GO:0050832	defense response to fungus	IEP	HCCA
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	HCCA
BP	GO:0051246	regulation of protein metabolic process	IEP	HCCA
BP	GO:0051336	regulation of hydrolase activity	IEP	HCCA
BP	GO:0051346	negative regulation of hydrolase activity	IEP	HCCA
BP	GO:0051707	response to other organism	IEP	HCCA
BP	GO:0052547	regulation of peptidase activity	IEP	HCCA
BP	GO:0052548	regulation of endopeptidase activity	IEP	HCCA
BP	GO:0055072	iron ion homeostasis	IEP	HCCA
MF	GO:0061135	endopeptidase regulator activity	IEP	HCCA
MF	GO:0070696	transmembrane receptor protein serine/threonine kinase binding	IEP	HCCA
BP	GO:0071214	cellular response to abiotic stimulus	IEP	HCCA
MF	GO:0080043	quercetin 3-O-glucosyltransferase activity	IEP	HCCA
MF	GO:0080054	low-affinity nitrate transmembrane transporter activity	IEP	HCCA
BP	GO:0090693	plant organ senescence	IEP	HCCA
BP	GO:0097305	response to alcohol	IEP	HCCA
BP	GO:0098542	defense response to other organism	IEP	HCCA
MF	GO:0098772	molecular function regulator	IEP	HCCA
BP	GO:0104004	cellular response to environmental stimulus	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901657	glycosyl compound metabolic process	IEP	HCCA
BP	GO:1901659	glycosyl compound biosynthetic process	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA
BP	GO:2000377	regulation of reactive oxygen species metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001554	Glyco_hydro_14	89	506

External Links

PLAZA 3.0 Dicots	AT4G17090

AT4G17090

Expression Profile

Co-expression Networks

Functional Annotation