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  5. AT4G17640

AT4G17640


Description : casein kinase II beta chain 2


Gene families : OG_01_0015275 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G17640
Cluster HCCA: Cluster_221


Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005956 protein kinase CK2 complex ISS Interproscan
BP GO:0006468 protein phosphorylation ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
CC GO:0000795 synaptonemal complex IEP HCCA
MF GO:0001091 RNA polymerase II general transcription initiation factor binding IEP HCCA
MF GO:0001093 TFIIB-class transcription factor binding IEP HCCA
MF GO:0001098 basal transcription machinery binding IEP HCCA
MF GO:0001099 basal RNA polymerase II transcription machinery binding IEP HCCA
BP GO:0002240 response to molecule of oomycetes origin IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
CC GO:0005769 early endosome IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009644 response to high light intensity IEP HCCA
BP GO:0009756 carbohydrate mediated signaling IEP HCCA
BP GO:0010165 response to X-ray IEP HCCA
BP GO:0010182 sugar mediated signaling pathway IEP HCCA
BP GO:0010212 response to ionizing radiation IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0042542 response to hydrogen peroxide IEP HCCA
BP GO:0042753 positive regulation of circadian rhythm IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0045087 innate immune response IEP HCCA
MF GO:0046982 protein heterodimerization activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051568 histone H3-K4 methylation IEP HCCA
MF GO:0070063 RNA polymerase binding IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0080050 regulation of seed development IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0099086 synaptonemal structure IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:2000034 regulation of seed maturation IEP HCCA
BP GO:2000693 positive regulation of seed maturation IEP HCCA
InterPro domains Description Start Stop
IPR000704 Casein_kinase_II_reg-sub 95 278
PLAZA 3.0 Dicots AT4G17640