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  5. AT4G17740

AT4G17740


Description : Peptidase S41 family protein


Gene families : OG_01_0004735 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004735_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G17740
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
Cre10.g420550 No alias Protein modification.peptide maturation.plastid.CtpA... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c9_5260V3.1 No alias Peptidase S41 family protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0005739 mitochondrion IDA Interproscan
BP GO:0006655 phosphatidylglycerol biosynthetic process RCA Interproscan
CC GO:0009543 chloroplast thylakoid lumen IDA Interproscan
CC GO:0009579 thylakoid IDA Interproscan
CC GO:0031977 thylakoid lumen IDA Interproscan
BP GO:0035556 intracellular signal transduction ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0004034 aldose 1-epimerase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006012 galactose metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006808 regulation of nitrogen utilization IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009532 plastid stroma IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009570 chloroplast stroma IEP HCCA
BP GO:0009657 plastid organization IEP HCCA
BP GO:0009658 chloroplast organization IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0048481 plant ovule development IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR005151 Tail-specific_protease 320 481
PLAZA 3.0 Dicots AT4G17740