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  5. AT4G17860

AT4G17860


Description : Protein of Unknown Function (DUF239)


Gene families : OG_01_0000542 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000542_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G17860
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AT2G38255 No alias Protein of Unknown Function (DUF239) 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G11660 No alias Protein of Unknown Function (DUF239) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G25410 No alias Protein of Unknown Function (DUF239) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G36680 No alias Protein of Unknown Function (DUF239) 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G36770 No alias Protein of Unknown Function (DUF239) 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G46810 No alias Protein of Unknown Function (DUF239) 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G46820 No alias Protein of Unknown Function (DUF239) 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0009828 plant-type cell wall loosening IEP HCCA
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0010337 regulation of salicylic acid metabolic process IEP HCCA
BP GO:0010565 regulation of cellular ketone metabolic process IEP HCCA
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0062012 regulation of small molecule metabolic process IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR025521 Neprosin_propep 28 87
IPR004314 Neprosin 131 350
PLAZA 3.0 Dicots AT4G17860