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Description : RING/U-box superfamily protein
Gene families : OG_01_0009836 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT4G17905 | |
| Cluster | HCCA: Cluster_190 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G03550 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001763 | morphogenesis of a branching structure | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0004630 | phospholipase D activity | IEP | HCCA |
| MF | GO:0004816 | asparagine-tRNA ligase activity | IEP | HCCA |
| BP | GO:0005985 | sucrose metabolic process | IEP | HCCA |
| BP | GO:0005986 | sucrose biosynthetic process | IEP | HCCA |
| BP | GO:0006421 | asparaginyl-tRNA aminoacylation | IEP | HCCA |
| BP | GO:0006643 | membrane lipid metabolic process | IEP | HCCA |
| BP | GO:0006995 | cellular response to nitrogen starvation | IEP | HCCA |
| MF | GO:0008131 | primary amine oxidase activity | IEP | HCCA |
| BP | GO:0009736 | cytokinin-activated signaling pathway | IEP | HCCA |
| BP | GO:0010014 | meristem initiation | IEP | HCCA |
| BP | GO:0010065 | primary meristem tissue development | IEP | HCCA |
| BP | GO:0010067 | procambium histogenesis | IEP | HCCA |
| BP | GO:0010075 | regulation of meristem growth | IEP | HCCA |
| BP | GO:0010087 | phloem or xylem histogenesis | IEP | HCCA |
| BP | GO:0010223 | secondary shoot formation | IEP | HCCA |
| BP | GO:0010346 | shoot axis formation | IEP | HCCA |
| BP | GO:0010410 | hemicellulose metabolic process | IEP | HCCA |
| BP | GO:0010413 | glucuronoxylan metabolic process | IEP | HCCA |
| MF | GO:0016157 | sucrose synthase activity | IEP | HCCA |
| MF | GO:0016641 | oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor | IEP | HCCA |
| BP | GO:0043562 | cellular response to nitrogen levels | IEP | HCCA |
| BP | GO:0044038 | cell wall macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0045491 | xylan metabolic process | IEP | HCCA |
| BP | GO:0045492 | xylan biosynthetic process | IEP | HCCA |
| BP | GO:0046466 | membrane lipid catabolic process | IEP | HCCA |
| BP | GO:0048507 | meristem development | IEP | HCCA |
| BP | GO:0048508 | embryonic meristem development | IEP | HCCA |
| BP | GO:0070589 | cellular component macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0070592 | cell wall polysaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0080165 | callose deposition in phloem sieve plate | IEP | HCCA |
| BP | GO:0090506 | axillary shoot meristem initiation | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 154 | 197 |
| PLAZA 3.0 Dicots | AT4G17905 |