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AT4G18375


Description : RNA-binding KH domain-containing protein


Gene families : OG_01_0012126 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G18375
Cluster HCCA: Cluster_184


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000959 mitochondrial RNA metabolic process IEP HCCA
BP GO:0003002 regionalization IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0003872 6-phosphofructokinase activity IEP HCCA
MF GO:0003886 DNA (cytosine-5-)-methyltransferase activity IEP HCCA
MF GO:0004609 phosphatidylserine decarboxylase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005945 6-phosphofructokinase complex IEP HCCA
BP GO:0006379 mRNA cleavage IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008378 galactosyltransferase activity IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0009008 DNA-methyltransferase activity IEP HCCA
BP GO:0009830 cell wall modification involved in abscission IEP HCCA
BP GO:0009900 dehiscence IEP HCCA
BP GO:0009901 anther dehiscence IEP HCCA
BP GO:0009954 proximal/distal pattern formation IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0010047 fruit dehiscence IEP HCCA
BP GO:0010051 xylem and phloem pattern formation IEP HCCA
MF GO:0010314 phosphatidylinositol-5-phosphate binding IEP HCCA
CC GO:0010445 nuclear dicing body IEP HCCA
BP GO:0010528 regulation of transposition IEP HCCA
BP GO:0010529 negative regulation of transposition IEP HCCA
BP GO:0010589 leaf proximal/distal pattern formation IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016458 obsolete gene silencing IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0018024 histone-lysine N-methyltransferase activity IEP HCCA
BP GO:0031054 pre-miRNA processing IEP HCCA
MF GO:0035197 siRNA binding IEP HCCA
MF GO:0035198 miRNA binding IEP HCCA
BP GO:0035279 mRNA cleavage involved in gene silencing by miRNA IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044277 cell wall disassembly IEP HCCA
BP GO:0045490 pectin catabolic process IEP HCCA
MF GO:0047268 galactinol-raffinose galactosyltransferase activity IEP HCCA
BP GO:0048446 petal morphogenesis IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0051568 histone H3-K4 methylation IEP HCCA
MF GO:0061980 regulatory RNA binding IEP HCCA
BP GO:0080156 mitochondrial mRNA modification IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP HCCA
BP GO:1900864 mitochondrial RNA modification IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 38 88
IPR004088 KH_dom_type_1 141 211
IPR004088 KH_dom_type_1 398 455
IPR004088 KH_dom_type_1 316 366
PLAZA 3.0 Dicots AT4G18375