AT4G19925

Description : Toll-Interleukin-Resistance (TIR) domain family protein

Gene families : OG_01_0000184 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G19925

Target	Alias	Description	ECC score	Gene Family Method
AT5G44900	No alias	Toll-Interleukin-Resistance (TIR) domain family protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G45000	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G45080	No alias	phloem protein 2-A6	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G45220	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004888	transmembrane signaling receptor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
CC	GO:0016020	membrane	ISS	Interproscan
MF	GO:0038023	signaling receptor activity	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0001666	response to hypoxia	IEP	HCCA
MF	GO:0005342	organic acid transmembrane transporter activity	IEP	HCCA
BP	GO:0010224	response to UV-B	IEP	HCCA
MF	GO:0015171	amino acid transmembrane transporter activity	IEP	HCCA
BP	GO:0036293	response to decreased oxygen levels	IEP	HCCA
BP	GO:0036294	cellular response to decreased oxygen levels	IEP	HCCA
BP	GO:0042991	obsolete transcription factor import into nucleus	IEP	HCCA
MF	GO:0046943	carboxylic acid transmembrane transporter activity	IEP	HCCA
BP	GO:0070482	response to oxygen levels	IEP	HCCA
BP	GO:0071453	cellular response to oxygen levels	IEP	HCCA
BP	GO:0071456	cellular response to hypoxia	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000157	TIR_dom	14	139

External Links

PLAZA 3.0 Dicots	AT4G19925