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  5. AT4G20930

AT4G20930


Description : 6-phosphogluconate dehydrogenase family protein


Gene families : OG_01_0006945 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006945_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G20930
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Mp2g00110.1 No alias 3-hydroxyisobutyrate dehydrogenase. 3-hydroxypropionate... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity ISS Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
CC GO:0000785 chromatin IEP HCCA
CC GO:0000811 GINS complex IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004301 epoxide hydrolase activity IEP HCCA
MF GO:0004371 glycerone kinase activity IEP HCCA
MF GO:0004462 lactoylglutathione lyase activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004587 ornithine-oxo-acid transaminase activity IEP HCCA
MF GO:0004753 saccharopine dehydrogenase activity IEP HCCA
MF GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity IEP HCCA
MF GO:0005275 amine transmembrane transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
CC GO:0005740 mitochondrial envelope IEP HCCA
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP HCCA
BP GO:0006071 glycerol metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006282 regulation of DNA repair IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006527 arginine catabolic process IEP HCCA
BP GO:0006536 glutamate metabolic process IEP HCCA
BP GO:0006551 leucine metabolic process IEP HCCA
BP GO:0006552 leucine catabolic process IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
BP GO:0006554 lysine catabolic process IEP HCCA
BP GO:0006560 proline metabolic process IEP HCCA
BP GO:0006561 proline biosynthetic process IEP HCCA
BP GO:0006591 ornithine metabolic process IEP HCCA
BP GO:0006593 ornithine catabolic process IEP HCCA
BP GO:0006625 protein targeting to peroxisome IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006775 fat-soluble vitamin metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0006995 cellular response to nitrogen starvation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008219 cell death IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0008824 cyanate hydratase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009063 cellular amino acid catabolic process IEP HCCA
BP GO:0009065 glutamine family amino acid catabolic process IEP HCCA
BP GO:0009068 aspartate family amino acid catabolic process IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009083 branched-chain amino acid catabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009439 cyanate metabolic process IEP HCCA
BP GO:0009440 cyanate catabolic process IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009646 response to absence of light IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
BP GO:0009723 response to ethylene IEP HCCA
BP GO:0009743 response to carbohydrate IEP HCCA
BP GO:0009744 response to sucrose IEP HCCA
BP GO:0009746 response to hexose IEP HCCA
BP GO:0009750 response to fructose IEP HCCA
BP GO:0009954 proximal/distal pattern formation IEP HCCA
BP GO:0009970 cellular response to sulfate starvation IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010189 vitamin E biosynthetic process IEP HCCA
BP GO:0015919 peroxisomal membrane transport IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016558 protein import into peroxisome matrix IEP HCCA
CC GO:0016604 nuclear body IEP HCCA
CC GO:0016607 nuclear speck IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016801 hydrolase activity, acting on ether bonds IEP HCCA
MF GO:0016803 ether hydrolase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0019400 alditol metabolic process IEP HCCA
BP GO:0019477 L-lysine catabolic process IEP HCCA
BP GO:0019544 arginine catabolic process to glutamate IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
MF GO:0030527 structural constituent of chromatin IEP HCCA
CC GO:0031261 DNA replication preinitiation complex IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034284 response to monosaccharide IEP HCCA
BP GO:0034285 response to disaccharide IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0040020 regulation of meiotic nuclear division IEP HCCA
BP GO:0042360 vitamin E metabolic process IEP HCCA
BP GO:0042362 fat-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042743 hydrogen peroxide metabolic process IEP HCCA
BP GO:0042744 hydrogen peroxide catabolic process IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043574 peroxisomal transport IEP HCCA
BP GO:0043617 cellular response to sucrose starvation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0045739 positive regulation of DNA repair IEP HCCA
BP GO:0045836 positive regulation of meiotic nuclear division IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046440 L-lysine metabolic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0047130 saccharopine dehydrogenase (NADP+, L-lysine-forming) activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0050897 cobalt ion binding IEP HCCA
BP GO:0051054 positive regulation of DNA metabolic process IEP HCCA
BP GO:0051445 regulation of meiotic cell cycle IEP HCCA
BP GO:0051446 positive regulation of meiotic cell cycle IEP HCCA
BP GO:0051783 regulation of nuclear division IEP HCCA
BP GO:0051785 positive regulation of nuclear division IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0070547 L-tyrosine aminotransferase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072662 protein localization to peroxisome IEP HCCA
BP GO:0072663 establishment of protein localization to peroxisome IEP HCCA
BP GO:0090068 positive regulation of cell cycle process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
BP GO:2001020 regulation of response to DNA damage stimulus IEP HCCA
BP GO:2001022 positive regulation of response to DNA damage stimulus IEP HCCA
InterPro domains Description Start Stop
IPR029154 NADP-bd 213 339
IPR006115 6PGDH_NADP-bd 39 209
PLAZA 3.0 Dicots AT4G20930