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  5. AT4G22150

AT4G22150


Description : plant UBX domain-containing protein 3


Gene families : OG_01_0003818 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003818_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G22150
Cluster HCCA: Cluster_441

Target Alias Description ECC score Gene Family Method Actions
Mp4g20810.1 No alias Plant UBX domain-containing protein 3 OS=Arabidopsis... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_08216.1 No alias substrate-to-CDC48 bridging factor (PUX3/4/5) 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0000741 karyogamy IEP HCCA
BP GO:0001709 cell fate determination IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006312 mitotic recombination IEP HCCA
BP GO:0006997 nucleus organization IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0009553 embryo sac development IEP HCCA
BP GO:0009612 response to mechanical stimulus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009933 meristem structural organization IEP HCCA
BP GO:0010212 response to ionizing radiation IEP HCCA
BP GO:0010225 response to UV-C IEP HCCA
BP GO:0010332 response to gamma radiation IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
CC GO:0016604 nuclear body IEP HCCA
CC GO:0016607 nuclear speck IEP HCCA
BP GO:0019722 calcium-mediated signaling IEP HCCA
BP GO:0019932 second-messenger-mediated signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048284 organelle fusion IEP HCCA
BP GO:0050826 response to freezing IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0051879 Hsp90 protein binding IEP HCCA
BP GO:2001020 regulation of response to DNA damage stimulus IEP HCCA
InterPro domains Description Start Stop
IPR001012 UBX_dom 292 366
IPR012989 SEP_domain 183 256
PLAZA 3.0 Dicots AT4G22150