AT4G23060

Description : IQ-domain 22

Gene families : OG_01_0009690 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G23060
Cluster	HCCA: Cluster_76

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005516	calmodulin binding	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009739	response to gibberellin	IEP	Interproscan
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000303	response to superoxide	IEP	HCCA
BP	GO:0000305	response to oxygen radical	IEP	HCCA
BP	GO:0000354	cis assembly of pre-catalytic spliceosome	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0004089	carbonate dehydratase activity	IEP	HCCA
CC	GO:0005635	nuclear envelope	IEP	HCCA
CC	GO:0005654	nucleoplasm	IEP	HCCA
CC	GO:0005686	U2 snRNP	IEP	HCCA
CC	GO:0005747	mitochondrial respiratory chain complex I	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
BP	GO:0006914	autophagy	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0009608	response to symbiont	IEP	HCCA
BP	GO:0009610	response to symbiotic fungus	IEP	HCCA
BP	GO:0009636	response to toxic substance	IEP	HCCA
BP	GO:0010188	response to microbial phytotoxin	IEP	HCCA
CC	GO:0015030	Cajal body	IEP	HCCA
CC	GO:0016604	nuclear body	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
BP	GO:0022618	ribonucleoprotein complex assembly	IEP	HCCA
CC	GO:0030532	small nuclear ribonucleoprotein complex	IEP	HCCA
CC	GO:0030964	NADH dehydrogenase complex	IEP	HCCA
CC	GO:0045271	respiratory chain complex I	IEP	HCCA
BP	GO:0061919	process utilizing autophagic mechanism	IEP	HCCA
BP	GO:0071826	ribonucleoprotein complex subunit organization	IEP	HCCA
CC	GO:0097525	spliceosomal snRNP complex	IEP	HCCA
CC	GO:0120114	Sm-like protein family complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000048	IQ_motif_EF-hand-BS	169	187
IPR025064	DUF4005	368	436

External Links

PLAZA 3.0 Dicots	AT4G23060