AT4G23450


Description : RING/U-box superfamily protein


Gene families : OG_01_0001143 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001143_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G23450
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
Mp6g04810.1 No alias E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IDA Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005737 cytoplasm IDA Interproscan
BP GO:0006914 autophagy RCA Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
BP GO:0009414 response to water deprivation IMP Interproscan
BP GO:0009737 response to abscisic acid IMP Interproscan
BP GO:0009789 positive regulation of abscisic acid-activated signaling pathway IMP Interproscan
BP GO:0010286 heat acclimation RCA Interproscan
BP GO:0010729 positive regulation of hydrogen peroxide biosynthetic process IMP Interproscan
Type GO Term Name Evidence Source
CC GO:0000323 lytic vacuole IEP HCCA
BP GO:0001558 regulation of cell growth IEP HCCA
MF GO:0004022 alcohol dehydrogenase (NAD+) activity IEP HCCA
MF GO:0004031 aldehyde oxidase activity IEP HCCA
MF GO:0004108 citrate (Si)-synthase activity IEP HCCA
MF GO:0004124 cysteine synthase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004416 hydroxyacylglutathione hydrolase activity IEP HCCA
MF GO:0004557 alpha-galactosidase activity IEP HCCA
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP HCCA
MF GO:0005274 allantoin:proton symporter activity IEP HCCA
MF GO:0005350 pyrimidine nucleobase transmembrane transporter activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
MF GO:0005547 phosphatidylinositol-3,4,5-trisphosphate binding IEP HCCA
CC GO:0005773 vacuole IEP HCCA
CC GO:0005881 cytoplasmic microtubule IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006089 lactate metabolic process IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006624 vacuolar protein processing IEP HCCA
BP GO:0006625 protein targeting to peroxisome IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006672 ceramide metabolic process IEP HCCA
BP GO:0006677 glycosylceramide metabolic process IEP HCCA
BP GO:0006687 glycosphingolipid metabolic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006809 nitric oxide biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006812 cation transport IEP HCCA
BP GO:0006816 calcium ion transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006972 hyperosmotic response IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0007568 aging IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009267 cellular response to starvation IEP HCCA
BP GO:0009404 toxin metabolic process IEP HCCA
BP GO:0009407 toxin catabolic process IEP HCCA
BP GO:0009438 methylglyoxal metabolic process IEP HCCA
BP GO:0009723 response to ethylene IEP HCCA
BP GO:0009738 abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
BP GO:0009962 regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP HCCA
MF GO:0010013 N-1-naphthylphthalamic acid binding IEP HCCA
BP GO:0010150 leaf senescence IEP HCCA
BP GO:0010260 animal organ senescence IEP HCCA
MF GO:0010293 abscisic aldehyde oxidase activity IEP HCCA
BP GO:0010350 cellular response to magnesium starvation IEP HCCA
BP GO:0010351 lithium ion transport IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0010555 response to mannitol IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015210 uracil transmembrane transporter activity IEP HCCA
MF GO:0015293 symporter activity IEP HCCA
MF GO:0015294 solute:cation symporter activity IEP HCCA
MF GO:0015295 solute:proton symporter activity IEP HCCA
BP GO:0015720 allantoin transport IEP HCCA
BP GO:0015855 pyrimidine nucleobase transport IEP HCCA
BP GO:0015857 uracil transport IEP HCCA
BP GO:0015919 peroxisomal membrane transport IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
BP GO:0016032 viral process IEP HCCA
BP GO:0016036 cellular response to phosphate starvation IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
BP GO:0016137 glycoside metabolic process IEP HCCA
BP GO:0016139 glycoside catabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0016558 protein import into peroxisome matrix IEP HCCA
MF GO:0016623 oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0018008 N-terminal peptidyl-glycine N-myristoylation IEP HCCA
BP GO:0018201 peptidyl-glycine modification IEP HCCA
MF GO:0018455 alcohol dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0018488 aryl-aldehyde oxidase activity IEP HCCA
BP GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione IEP HCCA
BP GO:0019374 galactolipid metabolic process IEP HCCA
BP GO:0019375 galactolipid biosynthetic process IEP HCCA
BP GO:0019377 glycolipid catabolic process IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019748 secondary metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
BP GO:0022604 regulation of cell morphogenesis IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0030149 sphingolipid catabolic process IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030308 negative regulation of cell growth IEP HCCA
BP GO:0031110 regulation of microtubule polymerization or depolymerization IEP HCCA
BP GO:0031111 negative regulation of microtubule polymerization or depolymerization IEP HCCA
BP GO:0031112 positive regulation of microtubule polymerization or depolymerization IEP HCCA
BP GO:0031113 regulation of microtubule polymerization IEP HCCA
BP GO:0031114 regulation of microtubule depolymerization IEP HCCA
BP GO:0031115 negative regulation of microtubule polymerization IEP HCCA
BP GO:0031117 positive regulation of microtubule depolymerization IEP HCCA
BP GO:0031333 negative regulation of protein-containing complex assembly IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
BP GO:0032026 response to magnesium ion IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032272 negative regulation of protein polymerization IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0032886 regulation of microtubule-based process IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0033293 monocarboxylic acid binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
BP GO:0034605 cellular response to heat IEP HCCA
BP GO:0034613 cellular protein localization IEP HCCA
BP GO:0034622 cellular protein-containing complex assembly IEP HCCA
BP GO:0035864 response to potassium ion IEP HCCA
BP GO:0035865 cellular response to potassium ion IEP HCCA
BP GO:0035966 response to topologically incorrect protein IEP HCCA
MF GO:0036440 citrate synthase activity IEP HCCA
BP GO:0042180 cellular ketone metabolic process IEP HCCA
BP GO:0042182 ketone catabolic process IEP HCCA
BP GO:0042594 response to starvation IEP HCCA
BP GO:0042631 cellular response to water deprivation IEP HCCA
BP GO:0042744 hydrogen peroxide catabolic process IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0042906 xanthine transport IEP HCCA
MF GO:0042907 xanthine transmembrane transporter activity IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
MF GO:0043325 phosphatidylinositol-3,4-bisphosphate binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043574 peroxisomal transport IEP HCCA
BP GO:0043933 protein-containing complex subunit organization IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0044766 multi-organism transport IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0045551 cinnamyl-alcohol dehydrogenase activity IEP HCCA
BP GO:0045926 negative regulation of growth IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0046185 aldehyde catabolic process IEP HCCA
BP GO:0046209 nitric oxide metabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046466 membrane lipid catabolic process IEP HCCA
BP GO:0046477 glycosylceramide catabolic process IEP HCCA
BP GO:0046479 glycosphingolipid catabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0046514 ceramide catabolic process IEP HCCA
BP GO:0046688 response to copper ion IEP HCCA
BP GO:0046794 transport of virus IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
CC GO:0048471 perinuclear region of cytoplasm IEP HCCA
BP GO:0048640 negative regulation of developmental growth IEP HCCA
MF GO:0050302 indole-3-acetaldehyde oxidase activity IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051494 negative regulation of cytoskeleton organization IEP HCCA
BP GO:0051495 positive regulation of cytoskeleton organization IEP HCCA
BP GO:0051510 regulation of unidimensional cell growth IEP HCCA
BP GO:0051511 negative regulation of unidimensional cell growth IEP HCCA
BP GO:0051592 response to calcium ion IEP HCCA
BP GO:0051596 methylglyoxal catabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051788 response to misfolded protein IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0061727 methylglyoxal catabolic process to lactate IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070370 cellular heat acclimation IEP HCCA
BP GO:0070507 regulation of microtubule cytoskeleton organization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070887 cellular response to chemical stimulus IEP HCCA
BP GO:0071214 cellular response to abiotic stimulus IEP HCCA
BP GO:0071216 cellular response to biotic stimulus IEP HCCA
BP GO:0071219 cellular response to molecule of bacterial origin IEP HCCA
BP GO:0071229 cellular response to acid chemical IEP HCCA
BP GO:0071280 cellular response to copper ion IEP HCCA
BP GO:0071286 cellular response to magnesium ion IEP HCCA
BP GO:0071322 cellular response to carbohydrate stimulus IEP HCCA
BP GO:0071325 cellular response to mannitol stimulus IEP HCCA
BP GO:0071462 cellular response to water stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072662 protein localization to peroxisome IEP HCCA
BP GO:0072663 establishment of protein localization to peroxisome IEP HCCA
BP GO:0072708 response to sorbitol IEP HCCA
BP GO:0072709 cellular response to sorbitol IEP HCCA
BP GO:0075733 intracellular transport of virus IEP HCCA
MF GO:0080025 phosphatidylinositol-3,5-bisphosphate binding IEP HCCA
BP GO:0080129 proteasome core complex assembly IEP HCCA
BP GO:0090693 plant organ senescence IEP HCCA
BP GO:0098754 detoxification IEP HCCA
BP GO:0104004 cellular response to environmental stimulus IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901701 cellular response to oxygen-containing compound IEP HCCA
BP GO:1901879 regulation of protein depolymerization IEP HCCA
BP GO:1901881 positive regulation of protein depolymerization IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
BP GO:1902579 multi-organism localization IEP HCCA
BP GO:1902904 negative regulation of supramolecular fiber organization IEP HCCA
BP GO:1902905 positive regulation of supramolecular fiber organization IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
BP GO:2001057 reactive nitrogen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 102 144
PLAZA 3.0 Dicots AT4G23450