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  5. AT4G23630

AT4G23630


Description : VIRB2-interacting protein 1


Gene families : OG_01_0000350 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G23630
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
Pp3c13_21220V3.1 No alias Reticulon family protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005773 vacuole IDA Interproscan
CC GO:0005783 endoplasmic reticulum IDA Interproscan
CC GO:0005783 endoplasmic reticulum ISS Interproscan
CC GO:0005789 endoplasmic reticulum membrane IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0071458 integral component of cytoplasmic side of endoplasmic reticulum membrane IDA Interproscan
CC GO:0071782 endoplasmic reticulum tubular network IDA Interproscan
BP GO:0071786 endoplasmic reticulum tubular network organization IMP Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000164 protein phosphatase type 1 complex IEP HCCA
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP HCCA
CC GO:0000502 proteasome complex IEP HCCA
BP GO:0000578 embryonic axis specification IEP HCCA
BP GO:0001101 response to acid chemical IEP HCCA
MF GO:0004708 MAP kinase kinase activity IEP HCCA
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP HCCA
MF GO:0005347 ATP transmembrane transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005635 nuclear envelope IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005795 Golgi stack IEP HCCA
CC GO:0005811 lipid droplet IEP HCCA
CC GO:0005829 cytosol IEP HCCA
CC GO:0005849 mRNA cleavage factor complex IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006498 N-terminal protein lipidation IEP HCCA
BP GO:0006499 N-terminal protein myristoylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006983 ER overload response IEP HCCA
BP GO:0006984 ER-nucleus signaling pathway IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
CC GO:0008540 proteasome regulatory particle, base subcomplex IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009269 response to desiccation IEP HCCA
BP GO:0009404 toxin metabolic process IEP HCCA
BP GO:0009407 toxin catabolic process IEP HCCA
BP GO:0009409 response to cold IEP HCCA
BP GO:0009414 response to water deprivation IEP HCCA
BP GO:0009415 response to water IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009798 axis specification IEP HCCA
BP GO:0009895 negative regulation of catabolic process IEP HCCA
BP GO:0009908 flower development IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0010506 regulation of autophagy IEP HCCA
BP GO:0010507 negative regulation of autophagy IEP HCCA
MF GO:0015215 nucleotide transmembrane transporter activity IEP HCCA
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP HCCA
MF GO:0015217 ADP transmembrane transporter activity IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0015865 purine nucleotide transport IEP HCCA
BP GO:0015866 ADP transport IEP HCCA
BP GO:0015867 ATP transport IEP HCCA
BP GO:0015868 purine ribonucleotide transport IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0018377 protein myristoylation IEP HCCA
BP GO:0019322 pentose biosynthetic process IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0019566 arabinose metabolic process IEP HCCA
BP GO:0019567 arabinose biosynthetic process IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030054 cell junction IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
MF GO:0030371 translation repressor activity IEP HCCA
BP GO:0031329 regulation of cellular catabolic process IEP HCCA
BP GO:0031330 negative regulation of cellular catabolic process IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034250 positive regulation of cellular amide metabolic process IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
BP GO:0035966 response to topologically incorrect protein IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0045727 positive regulation of translation IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048367 shoot system development IEP HCCA
MF GO:0050373 UDP-arabinose 4-epimerase activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051503 adenine nucleotide transport IEP HCCA
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051788 response to misfolded protein IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0071216 cellular response to biotic stimulus IEP HCCA
BP GO:0071472 cellular response to salt stress IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:0080024 indolebutyric acid metabolic process IEP HCCA
BP GO:0080129 proteasome core complex assembly IEP HCCA
BP GO:0090351 seedling development IEP HCCA
BP GO:0090567 reproductive shoot system development IEP HCCA
BP GO:0098754 detoxification IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR003388 Reticulon 90 244
PLAZA 3.0 Dicots AT4G23630