AT1G19080

Description : GINS complex protein

Gene families : OG_01_0003303 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003303_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G19080
Cluster	HCCA: Cluster_38

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT3G55490	No alias	GINS complex protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
CC	GO:0000811	GINS complex	ISS	Interproscan
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006260	DNA replication	None	Extended
BP	GO:0006261	DNA-dependent DNA replication	ISS	Interproscan
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009793	embryo development ending in seed dormancy	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
CC	GO:0031261	DNA replication preinitiation complex	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003725	double-stranded RNA binding	IEP	HCCA
MF	GO:0004396	hexokinase activity	IEP	HCCA
MF	GO:0005337	nucleoside transmembrane transporter activity	IEP	HCCA
BP	GO:0006310	DNA recombination	IEP	HCCA
BP	GO:0006635	fatty acid beta-oxidation	IEP	HCCA
BP	GO:0006808	regulation of nitrogen utilization	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
BP	GO:0007021	tubulin complex assembly	IEP	HCCA
BP	GO:0008156	negative regulation of DNA replication	IEP	HCCA
CC	GO:0008541	proteasome regulatory particle, lid subcomplex	IEP	HCCA
MF	GO:0008901	ferredoxin hydrogenase activity	IEP	HCCA
BP	GO:0009432	SOS response	IEP	HCCA
BP	GO:0010082	regulation of root meristem growth	IEP	HCCA
BP	GO:0010267	production of ta-siRNAs involved in RNA interference	IEP	HCCA
BP	GO:0010564	regulation of cell cycle process	IEP	HCCA
BP	GO:0010948	negative regulation of cell cycle process	IEP	HCCA
BP	GO:0015858	nucleoside transport	IEP	HCCA
BP	GO:0015864	pyrimidine nucleoside transport	IEP	HCCA
BP	GO:0015931	nucleobase-containing compound transport	IEP	HCCA
MF	GO:0016695	oxidoreductase activity, acting on hydrogen as donor	IEP	HCCA
MF	GO:0016699	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor	IEP	HCCA
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	HCCA
BP	GO:0016925	protein sumoylation	IEP	HCCA
BP	GO:0019395	fatty acid oxidation	IEP	HCCA
MF	GO:0019789	SUMO transferase activity	IEP	HCCA
BP	GO:0030422	production of siRNA involved in RNA interference	IEP	HCCA
BP	GO:0031050	dsRNA processing	IEP	HCCA
MF	GO:0031072	heat shock protein binding	IEP	HCCA
CC	GO:0031300	intrinsic component of organelle membrane	IEP	HCCA
CC	GO:0031301	integral component of organelle membrane	IEP	HCCA
CC	GO:0031306	intrinsic component of mitochondrial outer membrane	IEP	HCCA
CC	GO:0031307	integral component of mitochondrial outer membrane	IEP	HCCA
BP	GO:0031647	regulation of protein stability	IEP	HCCA
CC	GO:0032592	integral component of mitochondrial membrane	IEP	HCCA
BP	GO:0032875	regulation of DNA endoreduplication	IEP	HCCA
BP	GO:0032876	negative regulation of DNA endoreduplication	IEP	HCCA
MF	GO:0042393	histone binding	IEP	HCCA
BP	GO:0045489	pectin biosynthetic process	IEP	HCCA
BP	GO:0045931	positive regulation of mitotic cell cycle	IEP	HCCA
MF	GO:0050566	asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity	IEP	HCCA
BP	GO:0050821	protein stabilization	IEP	HCCA
MF	GO:0051879	Hsp90 protein binding	IEP	HCCA
BP	GO:0060249	anatomical structure homeostasis	IEP	HCCA
BP	GO:0060250	germ-line stem-cell niche homeostasis	IEP	HCCA
BP	GO:0070918	production of small RNA involved in gene silencing by RNA	IEP	HCCA
BP	GO:0070919	production of siRNA involved in gene silencing by small RNA	IEP	HCCA
BP	GO:0080036	regulation of cytokinin-activated signaling pathway	IEP	HCCA
BP	GO:0080038	positive regulation of cytokinin-activated signaling pathway	IEP	HCCA
BP	GO:0090329	regulation of DNA-dependent DNA replication	IEP	HCCA
CC	GO:0098573	intrinsic component of mitochondrial membrane	IEP	HCCA
BP	GO:2000104	negative regulation of DNA-dependent DNA replication	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR021151	GINS_A	45	147

External Links

PLAZA 3.0 Dicots	AT1G19080

AT1G19080

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation