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  5. AT4G25440

AT4G25440


Description : zinc finger WD40 repeat protein 1


Gene families : OG_01_0002050 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002050_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G25440
Cluster HCCA: Cluster_12


Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000280 nuclear division IEP HCCA
CC GO:0000808 origin recognition complex IEP HCCA
CC GO:0000811 GINS complex IEP HCCA
CC GO:0000814 ESCRT II complex IEP HCCA
BP GO:0000959 mitochondrial RNA metabolic process IEP HCCA
BP GO:0002832 negative regulation of response to biotic stimulus IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0004725 protein tyrosine phosphatase activity IEP HCCA
MF GO:0004750 ribulose-phosphate 3-epimerase activity IEP HCCA
MF GO:0004789 thiamine-phosphate diphosphorylase activity IEP HCCA
MF GO:0004834 tryptophan synthase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-dependent DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006772 thiamine metabolic process IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0007112 male meiosis cytokinesis IEP HCCA
BP GO:0007129 homologous chromosome pairing at meiosis IEP HCCA
BP GO:0007131 reciprocal meiotic recombination IEP HCCA
BP GO:0007349 cellularization IEP HCCA
MF GO:0008395 steroid hydroxylase activity IEP HCCA
MF GO:0008902 hydroxymethylpyrimidine kinase activity IEP HCCA
MF GO:0008972 phosphomethylpyrimidine kinase activity IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0009228 thiamine biosynthetic process IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009558 embryo sac cellularization IEP HCCA
BP GO:0009939 positive regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0010112 regulation of systemic acquired resistance IEP HCCA
BP GO:0010113 negative regulation of systemic acquired resistance IEP HCCA
BP GO:0010196 nonphotochemical quenching IEP HCCA
BP GO:0010245 radial microtubular system formation IEP HCCA
BP GO:0010268 brassinosteroid homeostasis IEP HCCA
BP GO:0010325 raffinose family oligosaccharide biosynthetic process IEP HCCA
MF GO:0010385 double-stranded methylated DNA binding IEP HCCA
BP GO:0010500 transmitting tissue development IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0018024 histone-lysine N-methyltransferase activity IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0030946 protein tyrosine phosphatase activity, metal-dependent IEP HCCA
CC GO:0031261 DNA replication preinitiation complex IEP HCCA
BP GO:0032102 negative regulation of response to external stimulus IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0033206 meiotic cytokinesis IEP HCCA
MF GO:0033984 indole-3-glycerol-phosphate lyase activity IEP HCCA
BP GO:0034308 primary alcohol metabolic process IEP HCCA
BP GO:0034309 primary alcohol biosynthetic process IEP HCCA
BP GO:0035825 homologous recombination IEP HCCA
BP GO:0042138 meiotic DNA double-strand break formation IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
MF GO:0046976 histone methyltransferase activity (H3-K27 specific) IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0048444 floral organ morphogenesis IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0055070 copper ion homeostasis IEP HCCA
BP GO:0055088 lipid homeostasis IEP HCCA
BP GO:0061640 cytoskeleton-dependent cytokinesis IEP HCCA
BP GO:0061982 meiosis I cell cycle process IEP HCCA
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP HCCA
BP GO:0070734 histone H3-K27 methylation IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:0080156 mitochondrial mRNA modification IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0090697 post-embryonic plant organ morphogenesis IEP HCCA
BP GO:0140527 reciprocal homologous recombination IEP HCCA
BP GO:1900864 mitochondrial RNA modification IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
BP GO:1990066 energy quenching IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 298 332
IPR001680 WD40_repeat 136 172
PLAZA 3.0 Dicots AT4G25440