1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT4G27400

AT4G27400


Description : Late embryogenesis abundant (LEA) protein-related


Gene families : OG_01_0000421 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000421_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G27400
Cluster HCCA: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
Mp7g08760.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_18650V3.1 No alias Late embryogenesis abundant (LEA) protein-related 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3s49_30V3.1 No alias Late embryogenesis abundant (LEA) protein-related 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
CC GO:0000323 lytic vacuole IEP HCCA
MF GO:0004311 farnesyltranstransferase activity IEP HCCA
MF GO:0004372 glycine hydroxymethyltransferase activity IEP HCCA
MF GO:0004536 deoxyribonuclease activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004871 obsolete signal transducer activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005615 extracellular space IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006812 cation transport IEP HCCA
MF GO:0008083 growth factor activity IEP HCCA
MF GO:0008422 beta-glucosidase activity IEP HCCA
MF GO:0008446 GDP-mannose 4,6-dehydratase activity IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
MF GO:0009672 auxin:proton symporter activity IEP HCCA
BP GO:0009832 plant-type cell wall biogenesis IEP HCCA
BP GO:0009834 plant-type secondary cell wall biogenesis IEP HCCA
BP GO:0009913 epidermal cell differentiation IEP HCCA
CC GO:0009925 basal plasma membrane IEP HCCA
BP GO:0009958 positive gravitropism IEP HCCA
MF GO:0010329 auxin efflux transmembrane transporter activity IEP HCCA
BP GO:0010453 regulation of cell fate commitment IEP HCCA
BP GO:0010455 positive regulation of cell fate commitment IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
MF GO:0015926 glucosidase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0019137 thioglucosidase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
MF GO:0030545 signaling receptor regulator activity IEP HCCA
MF GO:0030546 signaling receptor activator activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0030855 epithelial cell differentiation IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0045165 cell fate commitment IEP HCCA
BP GO:0045597 positive regulation of cell differentiation IEP HCCA
BP GO:0046685 response to arsenic-containing substance IEP HCCA
MF GO:0046910 pectinesterase inhibitor activity IEP HCCA
MF GO:0048018 receptor ligand activity IEP HCCA
BP GO:0048443 stamen development IEP HCCA
BP GO:0048829 root cap development IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
CC GO:0071944 cell periphery IEP HCCA
MF GO:0098772 molecular function regulator IEP HCCA
BP GO:2000012 regulation of auxin polar transport IEP HCCA
InterPro domains Description Start Stop
IPR009646 Root_cap 249 305
PLAZA 3.0 Dicots AT4G27400