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AT4G28270


Description : RING membrane-anchor 2


Gene families : OG_01_0001613 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001613_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G28270
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AT4G03510 No alias RING membrane-anchor 1 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IDA Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005783 endoplasmic reticulum IDA Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
CC GO:0000139 Golgi membrane IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0008154 actin polymerization or depolymerization IEP HCCA
BP GO:0008652 cellular amino acid biosynthetic process IEP HCCA
BP GO:0009061 anaerobic respiration IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0009556 microsporogenesis IEP HCCA
BP GO:0009646 response to absence of light IEP HCCA
BP GO:0009834 plant-type secondary cell wall biogenesis IEP HCCA
BP GO:0010264 myo-inositol hexakisphosphate biosynthetic process IEP HCCA
MF GO:0010296 prenylcysteine methylesterase activity IEP HCCA
BP GO:0010345 suberin biosynthetic process IEP HCCA
BP GO:0010417 glucuronoxylan biosynthetic process IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0030041 actin filament polymerization IEP HCCA
MF GO:0031210 phosphatidylcholine binding IEP HCCA
BP GO:0032958 inositol phosphate biosynthetic process IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0033517 myo-inositol hexakisphosphate metabolic process IEP HCCA
BP GO:0034293 sexual sporulation IEP HCCA
BP GO:0043934 sporulation IEP HCCA
BP GO:0048236 plant-type sporogenesis IEP HCCA
MF GO:0050062 long-chain-fatty-acyl-CoA reductase activity IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
BP GO:0051321 meiotic cell cycle IEP HCCA
MF GO:0051723 protein methylesterase activity IEP HCCA
MF GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR027370 Znf-RING_LisH 21 56
PLAZA 3.0 Dicots AT4G28270