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  5. AT4G29970

AT4G29970


Description : F-box and associated interaction domains-containing protein


Gene families : OG_01_0000008 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000008_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G29970
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AT1G30780 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G30790 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G30925 No alias phospholipase Cs 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31080 No alias F-box family protein 0.14 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31090 No alias F-box family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31163 No alias F-box associated ubiquitination effector family protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31620 No alias unknown protein; Has 9 Blast hits to 9 proteins in 2... 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G32420 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G32660 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G33010 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G43005 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G46840 No alias F-box family protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G46912 No alias F-box associated ubiquitination effector family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47350 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47730 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47765 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47810 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G50880 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G52495 No alias No description available 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G53360 No alias F-box associated ubiquitination effector family protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G53370 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G55070 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G60370 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G61060 No alias F-box family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G67130 No alias F-box family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G71290 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G13630 No alias F-box associated ubiquitination effector family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G16220 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G16450 No alias F-box and associated interaction domains-containing protein 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G16810 No alias F-box and associated interaction domains-containing protein 0.14 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G19630 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G21930 No alias F-box associated ubiquitination effector family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G23160 No alias F-box family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G31470 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G32470 No alias F-box associated ubiquitination effector family protein 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G40910 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G04660 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G10240 No alias F-box and associated interaction domains-containing protein 0.14 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G49440 No alias F-box associated ubiquitination effector family protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G49450 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G52320 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G57580 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G61340 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G13060 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G19930 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G19940 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G38870 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G22791 No alias F-box family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38810 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G42430 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G44345 No alias F-box associated ubiquitination effector family protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G50220 No alias F-box family protein 0.17 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G52610 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G52620 No alias F-box associated ubiquitination effector family protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G62060 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G62660 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G65850 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
BP GO:0010212 response to ionizing radiation IEP HCCA
BP GO:0010332 response to gamma radiation IEP HCCA
BP GO:0010466 negative regulation of peptidase activity IEP HCCA
BP GO:0010951 negative regulation of endopeptidase activity IEP HCCA
BP GO:0030162 regulation of proteolysis IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0032204 regulation of telomere maintenance IEP HCCA
BP GO:0032269 negative regulation of cellular protein metabolic process IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0043247 telomere maintenance in response to DNA damage IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0045861 negative regulation of proteolysis IEP HCCA
BP GO:0048653 anther development IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0051346 negative regulation of hydrolase activity IEP HCCA
BP GO:0052547 regulation of peptidase activity IEP HCCA
BP GO:0052548 regulation of endopeptidase activity IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR013187 F-box-assoc_dom_typ3 153 220
IPR001810 F-box_dom 13 52
PLAZA 3.0 Dicots AT4G29970