- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : embryo defective 1353
Gene families : OG_01_0002567 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002567_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT4G30090 | |
| Cluster | HCCA: Cluster_38 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005783 | endoplasmic reticulum | IDA | Interproscan |
| BP | GO:0009793 | embryo development ending in seed dormancy | NAS | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | HCCA |
| CC | GO:0000811 | GINS complex | IEP | HCCA |
| MF | GO:0003727 | single-stranded RNA binding | IEP | HCCA |
| MF | GO:0004396 | hexokinase activity | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006366 | transcription by RNA polymerase II | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009612 | response to mechanical stimulus | IEP | HCCA |
| BP | GO:0009969 | xyloglucan biosynthetic process | IEP | HCCA |
| BP | GO:0010383 | cell wall polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0010410 | hemicellulose metabolic process | IEP | HCCA |
| BP | GO:0010411 | xyloglucan metabolic process | IEP | HCCA |
| MF | GO:0016763 | pentosyltransferase activity | IEP | HCCA |
| MF | GO:0019200 | carbohydrate kinase activity | IEP | HCCA |
| CC | GO:0031261 | DNA replication preinitiation complex | IEP | HCCA |
| CC | GO:0031300 | intrinsic component of organelle membrane | IEP | HCCA |
| CC | GO:0031301 | integral component of organelle membrane | IEP | HCCA |
| CC | GO:0031306 | intrinsic component of mitochondrial outer membrane | IEP | HCCA |
| CC | GO:0031307 | integral component of mitochondrial outer membrane | IEP | HCCA |
| CC | GO:0032592 | integral component of mitochondrial membrane | IEP | HCCA |
| CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | HCCA |
| MF | GO:0033843 | xyloglucan 6-xylosyltransferase activity | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0035252 | UDP-xylosyltransferase activity | IEP | HCCA |
| MF | GO:0042285 | xylosyltransferase activity | IEP | HCCA |
| BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044038 | cell wall macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0055072 | iron ion homeostasis | IEP | HCCA |
| BP | GO:0055076 | transition metal ion homeostasis | IEP | HCCA |
| BP | GO:0070589 | cellular component macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0070592 | cell wall polysaccharide biosynthetic process | IEP | HCCA |
| CC | GO:0098573 | intrinsic component of mitochondrial membrane | IEP | HCCA |
No InterPro domains available for this sequence
| PLAZA 3.0 Dicots | AT4G30090 |