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AT4G30360


Description : cyclic nucleotide-gated channel 17


Gene families : OG_01_0003671 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003671_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G30360
Cluster HCCA: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
AT3G17700 No alias cyclic nucleotide-binding transporter 1 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity ISS Interproscan
MF GO:0005516 calmodulin binding ISS Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
MF GO:0030551 cyclic nucleotide binding ISS Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
CC GO:0000145 exocyst IEP HCCA
MF GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity IEP HCCA
BP GO:0003032 detection of oxygen IEP HCCA
MF GO:0004057 arginyltransferase activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005797 Golgi medial cisterna IEP HCCA
BP GO:0006464 cellular protein modification process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006491 N-glycan processing IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006498 N-terminal protein lipidation IEP HCCA
BP GO:0006499 N-terminal protein myristoylation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009100 glycoprotein metabolic process IEP HCCA
BP GO:0009593 detection of chemical stimulus IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0010483 pollen tube reception IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016598 protein arginylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0018377 protein myristoylation IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019902 phosphatase binding IEP HCCA
MF GO:0019903 protein phosphatase binding IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
BP GO:0031204 posttranslational protein targeting to membrane, translocation IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
CC GO:0031985 Golgi cisterna IEP HCCA
MF GO:0035252 UDP-xylosyltransferase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042285 xylosyltransferase activity IEP HCCA
BP GO:0042732 D-xylose metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043484 regulation of RNA splicing IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
CC GO:0043680 filiform apparatus IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044267 cellular protein metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046777 protein autophosphorylation IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
MF GO:0050513 glycoprotein 2-beta-D-xylosyltransferase activity IEP HCCA
BP GO:0050994 regulation of lipid catabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051703 biological process involved in intraspecies interaction between organisms IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070483 detection of hypoxia IEP HCCA
BP GO:0090332 stomatal closure IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 504 592
IPR005821 Ion_trans_dom 82 408
PLAZA 3.0 Dicots AT4G30360