1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT4G30400

AT4G30400


Description : RING/U-box superfamily protein


Gene families : OG_01_0003401 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003401_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G30400
Cluster HCCA: Cluster_129


Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
BP GO:0080167 response to karrikin IEP Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000038 very long-chain fatty acid metabolic process IEP HCCA
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
BP GO:0001933 negative regulation of protein phosphorylation IEP HCCA
MF GO:0003785 actin monomer binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004165 dodecenoyl-CoA delta-isomerase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity IEP HCCA
MF GO:0004725 protein tyrosine phosphatase activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006722 triterpenoid metabolic process IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
MF GO:0008395 steroid hydroxylase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0008809 carnitine racemase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0009411 response to UV IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
CC GO:0009897 external side of plasma membrane IEP HCCA
BP GO:0009913 epidermal cell differentiation IEP HCCA
CC GO:0009923 fatty acid elongase complex IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010115 regulation of abscisic acid biosynthetic process IEP HCCA
BP GO:0010143 cutin biosynthetic process IEP HCCA
BP GO:0010222 stem vascular tissue pattern formation IEP HCCA
BP GO:0010268 brassinosteroid homeostasis IEP HCCA
BP GO:0010315 auxin efflux IEP HCCA
BP GO:0010540 basipetal auxin transport IEP HCCA
BP GO:0010541 acropetal auxin transport IEP HCCA
BP GO:0010563 negative regulation of phosphorus metabolic process IEP HCCA
BP GO:0010565 regulation of cellular ketone metabolic process IEP HCCA
BP GO:0010588 cotyledon vascular tissue pattern formation IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
BP GO:0010928 regulation of auxin mediated signaling pathway IEP HCCA
MF GO:0015245 fatty acid transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0015908 fatty acid transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0016021 integral component of membrane IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0016104 triterpenoid biosynthetic process IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
BP GO:0016126 sterol biosynthetic process IEP HCCA
BP GO:0016128 phytosteroid metabolic process IEP HCCA
BP GO:0016129 phytosteroid biosynthetic process IEP HCCA
BP GO:0016131 brassinosteroid metabolic process IEP HCCA
BP GO:0016132 brassinosteroid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP HCCA
MF GO:0018454 acetoacetyl-CoA reductase activity IEP HCCA
MF GO:0018685 alkane 1-monooxygenase activity IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0019216 regulation of lipid metabolic process IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0019742 pentacyclic triterpenoid metabolic process IEP HCCA
BP GO:0019745 pentacyclic triterpenoid biosynthetic process IEP HCCA
BP GO:0019747 regulation of isoprenoid metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0030148 sphingolipid biosynthetic process IEP HCCA
BP GO:0030855 epithelial cell differentiation IEP HCCA
CC GO:0031209 SCAR complex IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
BP GO:0031400 negative regulation of protein modification process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
BP GO:0042326 negative regulation of phosphorylation IEP HCCA
BP GO:0042335 cuticle development IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0042446 hormone biosynthetic process IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0042761 very long-chain fatty acid biosynthetic process IEP HCCA
BP GO:0042814 monopolar cell growth IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043446 cellular alkane metabolic process IEP HCCA
BP GO:0043447 alkane biosynthetic process IEP HCCA
BP GO:0043455 regulation of secondary metabolic process IEP HCCA
BP GO:0043473 pigmentation IEP HCCA
BP GO:0043476 pigment accumulation IEP HCCA
BP GO:0043478 pigment accumulation in response to UV light IEP HCCA
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP HCCA
BP GO:0043480 pigment accumulation in tissues IEP HCCA
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045703 ketoreductase activity IEP HCCA
BP GO:0045926 negative regulation of growth IEP HCCA
BP GO:0045936 negative regulation of phosphate metabolic process IEP HCCA
BP GO:0046519 sphingoid metabolic process IEP HCCA
BP GO:0046520 sphingoid biosynthetic process IEP HCCA
BP GO:0046890 regulation of lipid biosynthetic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0048437 floral organ development IEP HCCA
BP GO:0048441 petal development IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048640 negative regulation of developmental growth IEP HCCA
BP GO:0048827 phyllome development IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050730 regulation of peptidyl-tyrosine phosphorylation IEP HCCA
BP GO:0050732 negative regulation of peptidyl-tyrosine phosphorylation IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051125 regulation of actin nucleation IEP HCCA
BP GO:0051127 positive regulation of actin nucleation IEP HCCA
BP GO:0051302 regulation of cell division IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0051495 positive regulation of cytoskeleton organization IEP HCCA
BP GO:0055088 lipid homeostasis IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0071944 cell periphery IEP HCCA
MF GO:0080023 3R-hydroxyacyl-CoA dehydratase activity IEP HCCA
BP GO:0080051 cutin transport IEP HCCA
MF GO:0097472 cyclin-dependent protein kinase activity IEP HCCA
CC GO:0098552 side of membrane IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
BP GO:0120178 steroid hormone biosynthetic process IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
BP GO:1902905 positive regulation of supramolecular fiber organization IEP HCCA
BP GO:1902930 regulation of alcohol biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 133 176
PLAZA 3.0 Dicots AT4G30400